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BaseInfo

ncRNA ID	novel_zma_miR4977
Species	Zea mays
Class	miRNA
Genome position	Chr4:227482349-227482435 [-]
Reference genome	RefGen_v4
Source	SRR2287163;SRR2089705
Length	24
Mature sequence(if miRNA)	1 - AGUUCAAAAUGUGUUGGAUUAUAU - 24
Stem-loop(if miRNA)	--           A     A         -------U        AA   AUAAUCCAAUA AUUUU AACUAACAC        UAGUUCAA  U   ||||||||||| ||||| |||||||||        ||||||||   UAUUAGGUUGU UAAAA UUGAUUGUG        AUUAGGUU  U UA           G     C         UCUAAUAU        GU
Stem-loop sequence	AUAAUCCAAUAAAUUUUAAACUAACACUUAGUUCAAAAUUUGUUGGAUUAUAUAAUCUGUGUUAGUUCAAAAUGUGUUGGAUUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT018583.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:983   CUAUAAACCACCACAUUUUGAACA   1006 Target Full Sequence	3.0	Zea mays clone EL01N0446D08.d mRNA sequence	NA	coding protein	psRNATarget
NM_001174740.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:960   CUAUAAACCACCACAUUUUGAACA   983 Target Full Sequence	3.0	Zea mays putative CBL-interacting protein kinase family protein (LOC100381968), mRNA	NA	coding protein	psRNATarget
BT062771.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:960   CUAUAAACCACCACAUUUUGAACA   983 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0344G24 mRNA, complete cds	NA	coding protein	psRNATarget
BT063579.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:732   CUAUAAACCACCACAUUUUGAACA   755 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0080P05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541687.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:354   CUAUAAACCACCACAUUUUGAACA   377 Target Full Sequence	3.0	PREDICTED: Zea mays CBL-interacting protein kinase 24 (LOC103634223), mRNA	NA	coding protein	psRNATarget
EU950785.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:344   CUAUAAACCACCACAUUUUGAACA   367 Target Full Sequence	3.0	Zea mays clone 622885 mRNA sequence	NA	coding protein	psRNATarget
XM_020547156.1	ncRNA:24   UAUAUUAGGUUGUGUAAAACUUGA   1   *|||||*|||*||||||||||||* targets:261   CUAUAAACCACCACAUUUUGAACA   284 Target Full Sequence	3.0	PREDICTED: Zea mays CBL-interacting protein kinase 9-like (LOC103644771), transcript variant X1, mRNA	NA	coding protein	psRNATarget