ncRNA ID | novel_zma_miR4971 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:190866664-190866822 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287163 |
Length | 21 |
Mature sequence(if miRNA) | 139 - UUGGAUUCAGAAUCAAAGGCU - 159 |
Stem-loop(if miRNA) |
-----         CGA     U   GU UC       AAAAGACACG    -AAG     -         ---C   -----G   C  GA      UUGAUUCUG   AAUCU GGG  C  UUUAGUA          GCCG    GGGUA UCUUGAGUU    UCG      CCG AC  U      |||||||||   ||||| |||  |  |||||||          ||||    ||||| |||||||||    |||      ||| ||      AACUAAGAC   UUAGG UCC  G  GAGUCGU          UGGC    CCCGU GGGAUUCAG    GGC      GGU UG  A UCGGA         ---     U   UG UA       ---------A    CAAG     U         AUUA   ACGACA   A  AU |
Stem-loop sequence | UUGAUUCUGCGAAAUCUUGGGGUCUCUUUAGUAAAAAGACACGGCCGAAGGGGUAUCUUGAGUUCUCGGCCGCACGAUAUAGUAUGGACAGCACGGAUUAGACUUAGGGUUGCCCGAACCGGUAUGCUGAGAUGGUCCUUGGAUUCAGAAUCAAAGGCU |