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BaseInfo

ncRNA ID novel_zma_miR4971
Species Zea mays
Class miRNA
Genome position Chr4:190866664-190866822 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 21
Mature sequence(if miRNA) 139 - UUGGAUUCAGAAUCAAAGGCU - 159
Stem-loop(if miRNA) -----         CGA     U   GU UC       AAAAGACACG    -AAG     -         ---C   -----G   C  GA
     UUGAUUCUG   AAUCU GGG  C  UUUAGUA          GCCG    GGGUA UCUUGAGUU    UCG      CCG AC  U
     |||||||||   ||||| |||  |  |||||||          ||||    ||||| |||||||||    |||      ||| ||
     AACUAAGAC   UUAGG UCC  G  GAGUCGU          UGGC    CCCGU GGGAUUCAG    GGC      GGU UG  A
UCGGA         ---     U   UG UA       ---------A    CAAG     U         AUUA   ACGACA   A  AU
Stem-loop sequence UUGAUUCUGCGAAAUCUUGGGGUCUCUUUAGUAAAAAGACACGGCCGAAGGGGUAUCUUGAGUUCUCGGCCGCACGAUAUAGUAUGGACAGCACGGAUUAGACUUAGGGUUGCCCGAACCGGUAUGCUGAGAUGGUCCUUGGAUUCAGAAUCAAAGGCU