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BaseInfo

ncRNA ID	novel_zma_miR4962
Species	Zea mays
Class	miRNA
Genome position	Chr3:103098559-103098719 [-]
Reference genome	RefGen_v4
Source	SRR2287163
Length	23
Mature sequence(if miRNA)	1 - AGCACAGGGACGGUGGUCGACGA - 23
Stem-loop(if miRNA)	--       --      UU  GG   GG    -- UG  GAGUGAUUGUUAAUGGGUAGAGUCUUGGGUUGAGUCGUAGAGUAACC   GUUGAUU  UGUCCC  GU  UUC  GUUG  A  AU                                               A   |||||||  ||||||  ||  |||  ||||  |  ||   CAGCUGG  GCAGGG  AC  ACG  GGUG  G  AU                                               A AG       UG      --  --   -A    UG --  GUGUGGUGUUCGACUGUCUGUACCAACGUGUUGUGUAUUGAGUACGG
Stem-loop sequence	GUUGAUUUGUCCCUUGUGGUUCGGGUUGAUGAUGAGUGAUUGUUAAUGGGUAGAGUCUUGGGUUGAGUCGUAGAGUAACCAAGGCAUGAGUUAUGUGUUGUGCAACCAUGUCUGUCAGCUUGUGGUGUGUAGGUGUGGAGCACAGGGACGGUGGUCGACGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008650231.2	ncRNA:23   AGCAGCUGGUGGCAGGGACACGA   1   *|||||||||||||||||||||| targets:2572   CCGUCGACCACCGUCCCUGUGCU   2594 Target Full Sequence	0.0	PREDICTED: Zea mays wall-associated receptor kinase 2-like (LOC103629036), transcript variant X8, mRNA	NA	coding protein	psRNATarget
BT017143.1	ncRNA:23   AGCAGCUGGUGGCAGGGACACGA   1   ||||||||||||||*|||||||| targets:401   UCGUCGACCACCGUACCUGUGCU   423 Target Full Sequence	1.5	Zea mays clone EL01N0366F04.c mRNA sequence	NA	coding protein	psRNATarget
EU948389.1	ncRNA:23   AGCAGCUGGUGGCAGGGACACGA   1   |||*||*|=|||||||||||||| targets:600   UCGCCGCCUACCGUCCCUGUGCU   622 Target Full Sequence	2.0	Zea mays clone 373866 mRNA sequence	NA	coding protein	psRNATarget