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BaseInfo

ncRNA ID novel_zma_miR4961
Species Zea mays
Class miRNA
Genome position Chr3:115069118-115069184 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - CGGUUUAGGGCUUAUUCUCGUCGG - 24
Stem-loop(if miRNA) --                        A     U
  GACGGGAAUAAGCCCUAAACCGAC GGAAU A
  |||||||||||||||||||||||| ||||| C
  CUGCUCUUAUUCGGGAUUUGGCUG CCUUA U
GG                        C     U
Stem-loop sequence GACGGGAAUAAGCCCUAAACCGACAGGAAUUACUUAUUCCCGUCGGUUUAGGGCUUAUUCUCGUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240820.1
ncRNA:24   GGCUGCUCUUAUUCGGGAUUUGGC   1
  ||||||=|||||||||||||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

1.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
JB169151.1
ncRNA:24   GGCUGCUCUUAUUCGGGAUUUGGC   1
  ||||||=|||||||||||||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

1.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget
HI408690.1
ncRNA:24   GGCUGCUCUUAUUCGGGAUUUGGC   1
  ||||||=|||||||||||||||||
targets:16   CCGACGGGAAUAAGCCCUAAACCG   39

1.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget