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BaseInfo

ncRNA ID osa-miRf10093-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUCGGGUCCACAUGUCAGCC - NA
Stem-loop(if miRNA)        G                         CUCAUUAUCGG   -   CA   CUU
CCAAAUG CACUCGGGUCCACAUGUCAGCCUCA           GUC CCG  UCA   U
||||||| |||||||||||||||||||||||||           ||| |||  |||
GGUUUAC GUGGGCCCGGGUGUACAGUCGGAGU           CAG GGU  AGU   U
       G                         -----------   A   -A   UUG
Stem-loop sequence CCAAAUGGCACUCGGGUCCACAUGUCAGCCUCACUCAUUAUCGGGUCCCGCAUCACUUUUGUUUGAAUGGAGACUGAGGCUGACAUGUGGGCCCGGGUGGCAUUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AB013449.2
ncRNA:20   CCGACUGUACACCUGGGCUC   1
  **||||||||||||||||||
targets:4133   CACUGACAUGUGGACCCGAG   4152

1.0 Oryza sativa Japonica Group mRNA for Pib, complete cds NA coding protein psRNATarget
XM_015756254.1
ncRNA:20   CCGACUGUACACCUGGGCUC   1
  |*|||||||||||=||||||
targets:37   GACUGACAUGUGGGCCCGAG   56

2.5 PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 17 (LOC4347449), transcript variant X1, mRNA NAC domain-containing protein 17(LOC4347449) coding protein psRNATarget