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BaseInfo

ncRNA ID	novel_zma_miR4954
Species	Zea mays
Class	miRNA
Genome position	Chr4:114098721-114098786 [+]
Reference genome	RefGen_v4
Source	SRR1618882;SRR1618883;SRR1745812;SRR4237220;SRR4237221;SRR4237223;SRR4237224;SRR4237225;SRR4237226;SRR4237227
Length	19
Mature sequence(if miRNA)	1 - CGCCCCACGGUGGGCGCCA - 19
Stem-loop(if miRNA)	--      AC   GGGCGCCAAAUGUUGGAACU   CGCCCC  GGU                    U   ||||||  |||                    G   GUGGGG  CAA                    C GU      -G   CCUAGGGGAACGUGGUCUCU
Stem-loop sequence	CGCCCCACGGUGGGCGCCAAAUGUUGGAACUUGCUCUCUGGUGCAAGGGGAUCCAACGGGGGUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672309.2	ncRNA:19   ACCGCGGGUGGCACCCCGC   1   *|||*=||||||||||||| targets:500   CGGCUUCCACCGUGGGGCG   518 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103647800 (LOC103647800), mRNA	NA	coding protein	psRNATarget
BT042086.1	ncRNA:19   ACCGCGGGUGGCACCCCGC   1   ||*|||*|||||||||||| targets:880   UGACGCACACCGUGGGGCG   898 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0127E21 mRNA, complete cds	NA	coding protein	psRNATarget
EU955368.1	ncRNA:19   ACCGCGGGUGGCACCCCGC   1   ||*|||*|||||||||||| targets:887   UGACGCACACCGUGGGGCG   905 Target Full Sequence	2.5	Zea mays clone 1529578 arogenate dehydrogenase isoform 2 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153957.1	ncRNA:19   ACCGCGGGUGGCACCCCGC   1   ||*|||*|||||||||||| targets:887   UGACGCACACCGUGGGGCG   905 Target Full Sequence	2.5	Zea mays arogenate dehydrogenase (LOC100281038), mRNA	NA	coding protein	psRNATarget
BT085368.1	ncRNA:19   ACCGCGGGUGGCACCCCGC   1   ||*|||*|||||||||||| targets:923   UGACGCACACCGUGGGGCG   941 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0003I13 mRNA, complete cds	NA	coding protein	psRNATarget