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BaseInfo

ncRNA ID novel_zma_miR4952
Species Zea mays
Class miRNA
Genome position Chr3:218285072-218285135 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - CAUAGCACUCGACAAAGAAGACAC - 24
Stem-loop(if miRNA) --CA         A        ACAC   UAU
    UAGCACUCG CAAAGAAG    ACU   G
    ||||||||| ||||||||    |||
    GUCGUGAGC GUUUCUUC    UGG   A
CUGC         A        AAAA   CCA
Stem-loop sequence CAUAGCACUCGACAAAGAAGACACACUUAUGAACCGGUAAAACUUCUUUGACGAGUGCUGCGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239197.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget
JB167528.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
HI407067.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget