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BaseInfo

ncRNA ID novel_zma_miR4949
Species Zea mays
Class miRNA
Genome position Chr2:149881606-149881805 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - AGAUAUAUUGAUUGUCGUUCUAUG - 24
Stem-loop(if miRNA) --   UA        GU                   C     CG UACC      A             A  A   U     CC   AAAA   U     U  U
  AGA  UAUUGAUU  CGUUCUAUGCUUUUGUUAG AUCUU  A    AGGUUA GAAUGUUUACAUA CU UAG AAAAU  AUA    CGU CGUGA AG U
  |||  ||||||||  ||||||||||||||||||| |||||  |    |||||| ||||||||||||| || ||| |||||  |||    ||| ||||| ||
  UCU  AUAAUUAA  GCAAGAUACGAAAACAAUC UAGAA  U    UCCAAU CUUAUAAAUGUAU GG AUU UUUUA  UAU    GCG GUAUU UC U
CG   UC        UG                   A     AA ---U      -             -  A   -     CA   -GAG   -     U  G
Stem-loop sequence AGAUAUAUUGAUUGUCGUUCUAUGCUUUUGUUAGCAUCUUCGAUACCAGGUUAAGAAUGUUUACAUAACUAUAGUAAAAUCCAUAAAAACGUUCGUGAUAGUUUGCUUUUAUGGCGGAGUAUACAUUUUUUAAGGUAUGUAAAUAUUCUAACCUUUAAAAGAUACUAACAAAAGCAUAGAACGGUAAUUAAUACUUCUGC