ncRNA ID | novel_zma_miR4949 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:149881606-149881805 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287163 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUAUAUUGAUUGUCGUUCUAUG - 24 |
Stem-loop(if miRNA) |
--   UA        GU                   C     CG UACC      A             A  A   U     CC   AAAA   U     U  U   AGA  UAUUGAUU  CGUUCUAUGCUUUUGUUAG AUCUU  A    AGGUUA GAAUGUUUACAUA CU UAG AAAAU  AUA    CGU CGUGA AG U   |||  ||||||||  ||||||||||||||||||| |||||  |    |||||| ||||||||||||| || ||| |||||  |||    ||| ||||| ||   UCU  AUAAUUAA  GCAAGAUACGAAAACAAUC UAGAA  U    UCCAAU CUUAUAAAUGUAU GG AUU UUUUA  UAU    GCG GUAUU UC U CG   UC        UG                   A     AA ---U      -             -  A   -     CA   -GAG   -     U  G |
Stem-loop sequence | AGAUAUAUUGAUUGUCGUUCUAUGCUUUUGUUAGCAUCUUCGAUACCAGGUUAAGAAUGUUUACAUAACUAUAGUAAAAUCCAUAAAAACGUUCGUGAUAGUUUGCUUUUAUGGCGGAGUAUACAUUUUUUAAGGUAUGUAAAUAUUCUAACCUUUAAAAGAUACUAACAAAAGCAUAGAACGGUAAUUAAUACUUCUGC |