ncRNA ID | novel_zma_miR4948 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:148581804-148581890 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287163;SRR2287164;SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACGGAGUGCAGGUAUAGGGAGGU - 24 |
Stem-loop(if miRNA) |
--   -G      A          GG      --G  UG    GUC   GAC  GAGUGC GGUAUAGGGA  UCCUCG   GG  GACU   U   |||  |||||| ||||||||||  ||||||   ||  ||||   CUG  CUUACG CUAUAUCCUU  GGGAGC   CU  UUGA   G GA   GG      -          -A      AGG  UU    AAU |
Stem-loop sequence | GACGGAGUGCAGGUAUAGGGAGGUCCUCGGGGUGGACUGUCUGUAAAGUUUUUCGGACGAGGGAUUCCUAUAUCGCAUUCGGGUCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001175223.1 |
|
2.0 | Zea mays putative MYB DNA-binding domain superfamily protein (MYB164), mRNA | NA | coding protein | psRNATarget | |||||||||
BT064525.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFc0177P23 mRNA, complete cds | NA | coding protein | psRNATarget |