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BaseInfo

ncRNA ID novel_zma_miR4945
Species Zea mays
Class miRNA
Genome position Chr2:88898673-88898741 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - CGGCUUAAAGCCGUCGGACAUAAC - 24
Stem-loop(if miRNA) --     U        C        C  AUCUCCG
  CGGCU AAAGCCGU GGACAUAA CU       A
  ||||| |||||||| |||||||| ||
  GCCGG UUUCGGCA CCUGUAUU GA       C
CU     -        A        C  AAUUUUG
Stem-loop sequence CGGCUUAAAGCCGUCGGACAUAACCUAUCUCCGACGUUUUAAAGCUUAUGUCCAACGGCUUUGGCCGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671903.2
ncRNA:24   CAAUACAGGCUGCCGAAAUUCGGC   1
  *||||*||||||||||||||||||
targets:1443   CUUAUCUCCGACGGCUUUAAGCCG   1466

1.0 PREDICTED: Zea mays flavonoid 3'-monooxygenase (LOC103647360), mRNA NA coding protein psRNATarget