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BaseInfo

ncRNA ID novel_zma_miR4941
Species Zea mays
Class miRNA
Genome position Chr2:70959051-70959131 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 58 - CACGCGACGUAGAUCCAAGCGGCA - 81
Stem-loop(if miRNA) --     G  G A     A   GG   GGAAUGACACCUUG
  CACGC AC U GAUCC AGC  CAA              G
  ||||| || | ||||| |||  |||              A
  GUGUG UG A UUGGG UCG  CUG              G
CG     G  G -     A   -G   GGGGUAGAGGAGGA
Stem-loop sequence CACGCGACGUAGAUCCAAGCGGCAAGGAAUGACACCUUGGAGAGGAGGAGAUGGGGGUCGGCUAGGGUUAGGUGGUGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU953887.1
ncRNA:24   ACGGCGAACCUAGAUGCAGCGCAC   1
  |*|||||*|||||||||||||||*
targets:149   UCCCGCUCGGAUCUACGUCGCGUU   172

2.0 Zea mays clone 1448560 hypothetical protein mRNA, complete cds NA coding protein psRNATarget