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BaseInfo

ncRNA ID novel_zma_miR4940
Species Zea mays
Class miRNA
Genome position Chr2:72300481-72300571 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 68 - UUUAUAACAAAUCGUAGGAAAUAA - 91
Stem-loop(if miRNA) --                    --AUAAAUAAC    G    G AAU
  UUUAUAACAAAUCGUAGGAA           UUCU AGAG C   U
  ||||||||||||||||||||           |||| |||| |
  AAAUAUUGUUUGGUAUCCUU           AAGG UCUC G   G
GA                    CAAUACAAAUA    A    - AUG
Stem-loop sequence UUUAUAACAAAUCGUAGGAAAUAAAUAACUUCUGAGAGGCAAUUGGUAGCUCUAGGAAAUAAACAUAACUUCCUAUGGUUUGUUAUAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   AAUAAAGGAUGCUAAACAAUAUUU   1
  ||||||||||||=|||||||||||
targets:1209   UUAUUUCCUACGGUUUGUUAUAAA   1232

1.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget