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BaseInfo

ncRNA ID	novel_zma_miR4937
Species	Zea mays
Class	miRNA
Genome position	Chr2:132211547-132211622 [-]
Reference genome	RefGen_v4
Source	SRR2287163
Length	21
Mature sequence(if miRNA)	1 - AUUGAGGUGAAUACGAGAUUA - 21
Stem-loop(if miRNA)	--C                            UGAUGUG    UCUUGUAUUCACCUCAAUCCAUGUGUAU       G    ||||||||||||||||||||||||||||    AGAGCAUAAGUGGAGUUAGGUACACAUA       A AUU                            UGGAGUU
Stem-loop sequence	CUCUUGUAUUCACCUCAAUCCAUGUGUAUUGAUGUGGAUUGAGGUAUACACAUGGAUUGAGGUGAAUACGAGAUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU942746.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   ||*|||=|||||||||||||| targets:335   UACUCUUGUAUUCACCUCAAU   355 Target Full Sequence	2.0	Zea mays clone 1533321 mRNA sequence	NA	coding protein	psRNATarget
XM_020539168.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   ||*|||*|||||||||||||| targets:1317   UACUCUAGUAUUCACCUCAAU   1337 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC107275233 (LOC107275233), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU950672.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   ||*|||*|||||||||||||| targets:1020   UACUCUAGUAUUCACCUCAAU   1040 Target Full Sequence	2.0	Zea mays clone 508256 mRNA sequence	NA	coding protein	psRNATarget
EU961221.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:990   CUGUCUAGUAUUCACCUCAAU   1010 Target Full Sequence	2.0	Zea mays clone 233606 ras-related protein ARA-3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001155425.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:990   CUGUCUAGUAUUCACCUCAAU   1010 Target Full Sequence	2.0	Zea mays uncharacterized LOC100282517 (pco128668), mRNA	NA	coding protein	psRNATarget
XM_008669748.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:993   CUGUCUAGUAUUCACCUCAAU   1013 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100282517 (pco128668), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069613.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:1042   CUGUCUAGUAUUCACCUCAAU   1062 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0181A19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008669749.2	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:931   CUGUCUAGUAUUCACCUCAAU   951 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100282517 (pco128668), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT035355.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:931   CUGUCUAGUAUUCACCUCAAU   951 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0057D23 mRNA, complete cds	NA	coding protein	psRNATarget
AY108224.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:990   CUGUCUAGUAUUCACCUCAAU   1010 Target Full Sequence	2.0	Zea mays PCO128668 mRNA sequence	NA	coding protein	psRNATarget
XM_008669750.2	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||| targets:700   CUGUCUAGUAUUCACCUCAAU   720 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100282517 (pco128668), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020552829.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   ||*|*||*||||||||||||| targets:2512   UAUUAUCAUAUUCACCUCAAU   2532 Target Full Sequence	3.0	PREDICTED: Zea mays long chain acyl-CoA synthetase 9, chloroplastic (LOC103654554), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681400.2	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   ||*|*||*||||||||||||| targets:2496   UAUUAUCAUAUUCACCUCAAU   2516 Target Full Sequence	3.0	PREDICTED: Zea mays long chain acyl-CoA synthetase 9, chloroplastic (LOC103654554), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU954572.1	ncRNA:21   AUUAGAGCAUAAGUGGAGUUA   1   **=|||*|||||||||||||* targets:964   CUGUCUAGUAUUCACCUCAAA   984 Target Full Sequence	3.0	Zea mays clone 1471227 ras-related protein ARA-3 mRNA, complete cds	NA	coding protein	psRNATarget