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BaseInfo

ncRNA ID novel_zma_miR4935
Species Zea mays
Class miRNA
Genome position Chr2:173918002-173918064 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - GGGCUUAUUUUCGGCGGCGUCUGG - 24
Stem-loop(if miRNA) --                  A     AUUUU
  AGACGCCGCCGAAAAUAA CCCUU     C
  |||||||||||||||||| |||||     G
  UCUGCGGCGGCUUUUAUU GGGAA     G
GG                  C     ACGGC
Stem-loop sequence AGACGCCGCCGAAAAUAAACCCUUAUUUUCGGCGGCAAAGGGCUUAUUUUCGGCGGCGUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407204.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
JB167665.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget
LQ239334.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget