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BaseInfo

ncRNA ID	novel_zma_miR4929
Species	Zea mays
Class	miRNA
Genome position	Chr8:134766689-134766835 [+]
Reference genome	RefGen_v4
Source	SRR1583941
Length	21
Mature sequence(if miRNA)	127 - UAACCGAACAAGCCCUAAGCG - 147
Stem-loop(if miRNA)	--  A   U            -   C    A  CA       GA          AAAAA   UUAAGAAGUUUGA   CU AGG CUUGUUCGGUUA UUC CAAU CA  UGGAUUG  UGGGAUUGGA     UUC             C   || ||| |||||||||||| ||| |||| ||  |||||||  ||||||||||     |||             U   GA UCC GAACAAGCCAAU GAG GUUA GU  ACCUAAC  ACCCUAACCU     ACA             U GC  A   C            C   A    G  AC       UC          ---AC   AACUUAGGGUUUG
Stem-loop sequence	CUAAGGUCUUGUUCGGUUAUUCCCAAUACACAUGGAUUGGAUGGGAUUGGAAAAAAUUCUUAAGAAGUUUGACUUGUUUGGGAUUCAAACACAUCCAAUCCCACUCAAUCCACAUGGAUUGAGAGCUAACCGAACAAGCCCUAAGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY103588.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|||||||||||||||||||| targets:1396   UGCUUAGGGCUUGUUCGGUUA   1416 Target Full Sequence	0.0	Zea mays PCO114222 mRNA sequence	NA	coding protein	psRNATarget
EZ097020.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|=|||||||||||||||||| targets:31   UGUUUAGGGCUUGUUCGGUUA   51 Target Full Sequence	1.0	TSA: Zea mays contig32675, mRNA sequence	NA	coding protein	psRNATarget
BT018592.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|=|||||||||||||||||| targets:1001   UGUUUAGGGCUUGUUCGGUUA   1021 Target Full Sequence	1.0	Zea mays clone EL01N0447E06.d mRNA sequence	NA	coding protein	psRNATarget
EU966790.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =||||||||||||||=||||| targets:1378   UGCUUAGGGCUUGUUUGGUUA   1398 Target Full Sequence	1.5	Zea mays clone 297432 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds	NA	coding protein	psRNATarget
EU962948.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =||||||||||||||=||||| targets:1378   UGCUUAGGGCUUGUUUGGUUA   1398 Target Full Sequence	1.5	Zea mays clone 246807 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds	NA	coding protein	psRNATarget
EU966290.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =||||||||||||||=||||| targets:1422   UGCUUAGGGCUUGUUUGGUUA   1442 Target Full Sequence	1.5	Zea mays clone 293206 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156787.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =||||||||||||||=||||| targets:1422   UGCUUAGGGCUUGUUUGGUUA   1442 Target Full Sequence	1.5	Zea mays pyruvate dehydrogenase E1 component alpha subunit (LOC100283889), mRNA	NA	coding protein	psRNATarget
EZ100118.1	ncRNA:21   GCG-AAUCCCGAACAAGCCAAU   1   |||-|||||||||||||||||| targets:21   CGCAUUAGGGCUUGUUCGGUUA   42 Target Full Sequence	2.0	TSA: Zea mays contig35773, mRNA sequence	NA	coding protein	psRNATarget
EZ101759.1	ncRNA:21   GCG--AAUCCCGAACAAGCCAAU   1   |||--|||||||||||||||||| targets:5   CGCCCUUAGGGCUUGUUCGGUUA   27 Target Full Sequence	2.5	TSA: Zea mays contig37415, mRNA sequence	NA	coding protein	psRNATarget
EU964623.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|=|||||||||||||||||| targets:1419   GGUUUAGGGCUUGUUCGGUUA   1439 Target Full Sequence	1.0	Zea mays clone 280415 sorting nexin 1 mRNA, complete cds	NA	coding protein	psRNATarget
EZ095217.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||| targets:30   CACUUAGGGCUUGUUCGGUUA   50 Target Full Sequence	0.0	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
EZ107338.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||| targets:80   CACUUAGGGCUUGUUCGGUUA   100 Target Full Sequence	0.0	TSA: Zea mays contig42996, mRNA sequence	NA	coding protein	psRNATarget
EU951448.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||| targets:652   CACUUAGGGCUUGUUCGGUUA   672 Target Full Sequence	0.0	Zea mays clone 701961 mRNA sequence	NA	coding protein	psRNATarget
BT085319.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||| targets:83   CACUUAGGGCUUGUUCGGUUA   103 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0375P22 mRNA, complete cds	NA	coding protein	psRNATarget
BT069231.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||| targets:966   CCCUUAGGGCUUGUUCGGUUA   986 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0366D18 mRNA, complete cds	NA	coding protein	psRNATarget
BT018247.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||| targets:364   GUCUUAGGGCUUGUUCGGUUA   384 Target Full Sequence	0.0	Zea mays clone EL01N0563E06.c mRNA sequence	NA	coding protein	psRNATarget
XM_008656925.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||||||| targets:14   UCCUUAGGGCUUGUUCGGUUA   34 Target Full Sequence	0.0	PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT086570.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||| targets:120   ACCUUAGGGCUUGUUCGGUUA   140 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008659614.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   ||=|||-||||||||||||||| targets:91   CGUUUAAGGGCUUGUUCGGUUA   112 Target Full Sequence	3.0	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase A (LOC103637414), mRNA	NA	coding protein	psRNATarget
BT018572.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||| targets:1743   AUCUUAGGGCUUGUUCGGUUA   1763 Target Full Sequence	0.0	Zea mays clone EL01N0443D02.d mRNA sequence	NA	coding protein	psRNATarget
XM_008674024.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||||||| targets:3794   UACUUAGGGCUUGUUCGGUUA   3814 Target Full Sequence	0.0	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674023.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||||||| targets:3808   UACUUAGGGCUUGUUCGGUUA   3828 Target Full Sequence	0.0	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674025.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||||||| targets:3926   UACUUAGGGCUUGUUCGGUUA   3946 Target Full Sequence	0.0	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674021.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||||||| targets:3941   UACUUAGGGCUUGUUCGGUUA   3961 Target Full Sequence	0.0	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ106534.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||||||||||||||||||= targets:40   CUCUUAGGGCUUGUUCGGUUG   60 Target Full Sequence	1.0	TSA: Zea mays contig42192, mRNA sequence	NA	coding protein	psRNATarget
NM_001157439.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:438   CUUUUAGGGCUUGUUCGGUUA   458 Target Full Sequence	1.0	Zea mays protein transport protein SEC61 gamma subunit (LOC100284544), mRNA	NA	coding protein	psRNATarget
EU968801.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:438   CUUUUAGGGCUUGUUCGGUUA   458 Target Full Sequence	1.0	Zea mays clone 324211 protein transport protein SEC61 gamma subunit mRNA, complete cds	NA	coding protein	psRNATarget
BT037847.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1199   CAUUUAGGGCUUGUUCGGUUA   1219 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0199C24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174684.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1195   CUUUUAGGGCUUGUUCGGUUA   1215 Target Full Sequence	1.0	Zea mays Elongation factor G-1 mitochondrial (pco134899), mRNA	NA	coding protein	psRNATarget
BT062563.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1195   CUUUUAGGGCUUGUUCGGUUA   1215 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0314E20 mRNA, complete cds	NA	coding protein	psRNATarget
AY109413.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*|||||||||||||=||||| targets:1547   CACUUAGGGCUUGUUUGGUUA   1567 Target Full Sequence	1.5	Zea mays CL2362_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008680349.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1873   CCUUUAGGGCUUGUUCGGUUA   1893 Target Full Sequence	1.0	PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008645434.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:2438   CUUUUAGGGCUUGUUCGGUUA   2458 Target Full Sequence	1.0	PREDICTED: Zea mays Elongation factor G-1 mitochondrial (pco134899), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541449.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:2707   CCUUUAGGGCUUGUUCGGUUA   2727 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541448.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:2811   CCUUUAGGGCUUGUUCGGUUA   2831 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549843.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:988   CAUUUAGGGCUUGUUCGGUUA   1008 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020549841.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1106   CAUUUAGGGCUUGUUCGGUUA   1126 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549842.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=|||||||||||||||||| targets:1106   CAUUUAGGGCUUGUUCGGUUA   1126 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU949641.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **=|||||||||||||||||| targets:361   GAUUUAGGGCUUGUUCGGUUA   381 Target Full Sequence	1.0	Zea mays clone 438540 mRNA sequence	NA	coding protein	psRNATarget
EU951101.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **=|||||||||||||||||| targets:618   GAUUUAGGGCUUGUUCGGUUA   638 Target Full Sequence	1.0	Zea mays clone 687881 mRNA sequence	NA	coding protein	psRNATarget
BT040386.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||= targets:816   GCCUUAGGGCUUGUUCGGUUG   836 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0088H06 mRNA, complete cds	NA	coding protein	psRNATarget
EU956028.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*=|||||||||||||||||| targets:1446   UAUUUAGGGCUUGUUCGGUUA   1466 Target Full Sequence	1.0	Zea mays clone 1555850 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT062929.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*=|||||||||||||||||| targets:1535   UAUUUAGGGCUUGUUCGGUUA   1555 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0008K15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147345.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*=|||||||||||||||||| targets:1636   UAUUUAGGGCUUGUUCGGUUA   1656 Target Full Sequence	1.0	Zea mays uncharacterized LOC100272892 (LOC100272892), mRNA	NA	coding protein	psRNATarget
BT039694.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*=|||||||||||||||||| targets:1636   UAUUUAGGGCUUGUUCGGUUA   1656 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0039F21 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551710.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **=|||||||||||||||||| targets:3215   GAUUUAGGGCUUGUUCGGUUA   3235 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020551708.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **=|||||||||||||||||| targets:4850   GAUUUAGGGCUUGUUCGGUUA   4870 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU959169.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||| targets:626   AGCUAAGGGCUUGUUCGGUUA   646 Target Full Sequence	1.0	Zea mays clone 211416 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149888.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||| targets:626   AGCUAAGGGCUUGUUCGGUUA   646 Target Full Sequence	1.0	Zea mays uncharacterized LOC100275986 (LOC100275986), mRNA	NA	coding protein	psRNATarget
NM_001175812.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *||||||*||||||||||||| targets:1427   AGCUUAGUGCUUGUUCGGUUA   1447 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA	NA	coding protein	psRNATarget
BT066364.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *||||||*||||||||||||| targets:1427   AGCUUAGUGCUUGUUCGGUUA   1447 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds	NA	coding protein	psRNATarget
EU951312.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:293   CUGUUAGGGCUUGUUCGGUUA   313 Target Full Sequence	1.0	Zea mays clone 695515 mRNA sequence	NA	coding protein	psRNATarget
AY109681.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|*||||||||||||=||||| targets:651   UGGUUAGGGCUUGUUUGGUUA   671 Target Full Sequence	2.5	Zea mays CL7835_1 mRNA sequence	NA	coding protein	psRNATarget
XM_020553062.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:803   CUAUUAGGGCUUGUUCGGUUA   823 Target Full Sequence	1.0	PREDICTED: Zea mays CASP-like protein 12 (LOC100193285), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU972046.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||* targets:687   AACUUAGGGCUUGUUCGGUUC   707 Target Full Sequence	1.0	Zea mays clone 373861 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138428.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:854   CUAUUAGGGCUUGUUCGGUUA   874 Target Full Sequence	1.0	Zea mays CASP-like protein 12 (LOC100193285), mRNA	NA	coding protein	psRNATarget
BT036499.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:948   CUAUUAGGGCUUGUUCGGUUA   968 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0119B07 mRNA, complete cds	NA	coding protein	psRNATarget
AY104043.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:833   CUGUUAGGGCUUGUUCGGUUA   853 Target Full Sequence	1.0	Zea mays PCO145885 mRNA sequence	NA	coding protein	psRNATarget
BT068594.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:830   CUGUUAGGGCUUGUUCGGUUA   850 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0348O14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151506.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:860   CUGUUAGGGCUUGUUCGGUUA   880 Target Full Sequence	1.0	Zea mays ER membrane protein complex subunit 7-like protein (pco145885(696)), mRNA	NA	coding protein	psRNATarget
EU972032.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:860   CUGUUAGGGCUUGUUCGGUUA   880 Target Full Sequence	1.0	Zea mays clone 373636 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
AY103719.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***|||||||||||||||||| targets:785   ACAUUAGGGCUUGUUCGGUUA   805 Target Full Sequence	1.0	Zea mays PCO137008 mRNA sequence	NA	coding protein	psRNATarget
EU974225.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:1083   CUAUUAGGGCUUGUUCGGUUA   1103 Target Full Sequence	1.0	Zea mays clone 443257 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT068463.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:1132   CUGUUAGGGCUUGUUCGGUUA   1152 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0213N24 mRNA, complete cds	NA	coding protein	psRNATarget
BT035508.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:1273   CUAUUAGGGCUUGUUCGGUUA   1293 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0066P20 mRNA, complete cds	NA	coding protein	psRNATarget
BT040208.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:1271   CAGUUAGGGCUUGUUCGGUUA   1291 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0071O17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020553538.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***|||||||||||||||||| targets:1793   AUGUUAGGGCUUGUUCGGUUA   1813 Target Full Sequence	1.0	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645867.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***|||||||||||||||||| targets:1859   AUGUUAGGGCUUGUUCGGUUA   1879 Target Full Sequence	1.0	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020543715.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|*||||||||||||=||||| targets:1863   UGGUUAGGGCUUGUUUGGUUA   1883 Target Full Sequence	2.5	PREDICTED: Zea mays myosin heavy chain-related (cl7835_1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008658770.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:2754   CUGUUAGGGCUUGUUCGGUUA   2774 Target Full Sequence	1.0	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 (LOC103636410), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008658769.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:2763   CUGUUAGGGCUUGUUCGGUUA   2783 Target Full Sequence	1.0	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 (LOC103636410), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547644.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||||||||||||||* targets:2506   ACCUUAGGGCUUGUUCGGUUU   2526 Target Full Sequence	1.0	PREDICTED: Zea mays putative ABC1 and kinase-like domain family protein (LOC100279203), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001350737.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |**|||||||||||||||||| targets:3958   CCAUUAGGGCUUGUUCGGUUA   3978 Target Full Sequence	1.0	Zea mays phospholipase D family protein (LOC100272416), mRNA	NA	coding protein	psRNATarget
XM_008660174.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=||||||||||||=||||| targets:3499   CCUUUAGGGCUUGUUUGGUUA   3519 Target Full Sequence	2.5	PREDICTED: Zea mays Protein CHAPERONE-LIKE PROTEIN OF POR1 chloroplastic (LOC100276880), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT064472.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |||*||-||||||||||||||| targets:1333   CGCGUAAGGGCUUGUUCGGUUA   1354 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0172D22 mRNA, complete cds	NA	coding protein	psRNATarget
BT040193.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |||*||-||||||||||||||| targets:1377   CGCGUAAGGGCUUGUUCGGUUA   1398 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0070L08 mRNA, complete cds	NA	coding protein	psRNATarget
AY105910.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |||*||-||||||||||||||| targets:1395   CGCGUAAGGGCUUGUUCGGUUA   1416 Target Full Sequence	3.0	Zea mays PCO106969 mRNA sequence	NA	coding protein	psRNATarget
NM_001148011.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |||*||-||||||||||||||| targets:1409   CGCGUAAGGGCUUGUUCGGUUA   1430 Target Full Sequence	3.0	Zea mays uncharacterized LOC100273594 (AY105910), mRNA	NA	coding protein	psRNATarget
BT041454.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |||*||-||||||||||||||| targets:1409   CGCGUAAGGGCUUGUUCGGUUA   1430 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0061I22 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651215.2	ncRNA:21   GCGAA-UCCCGAACAAGCCAAU   1   |*|||-|||||||||||||||| targets:360   CACUUGAGGGCUUGUUCGGUUA   381 Target Full Sequence	2.0	PREDICTED: Zea mays putative domain of unknown function (DUF641) containing family protein (LOC103630129), mRNA	NA	coding protein	psRNATarget
BT041883.1	ncRNA:21   GCGAA--UCCCGAACAAGCCAAU   1   |*|||--|||||||||||||||| targets:777   CCCUUGUAGGGCUUGUUCGGUUA   799 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073E14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062257.1	ncRNA:21   GCGAA--UCCCGAACAAGCCAAU   1   |*|||--|||||||||||||||| targets:1076   CCCUUGUAGGGCUUGUUCGGUUA   1098 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234J14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062066.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*|||||||||||||=||||* targets:1501   CACUUAGGGCUUGUUUGGUUU   1521 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0211I24 mRNA, complete cds	NA	coding protein	psRNATarget
EU963392.1	ncRNA:21   GCGAA-UCCCGAACAAGCCAAU   1   =*|||-|||||||||||||||| targets:1602   UCCUUGAGGGCUUGUUCGGUUA   1623 Target Full Sequence	2.0	Zea mays clone 261790 cytochrome P450 CYP71K14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175832.1	ncRNA:21   GCGAA-UCCCGAACAAGCCAAU   1   =*|||-|||||||||||||||| targets:1602   UCCUUGAGGGCUUGUUCGGUUA   1623 Target Full Sequence	2.0	Zea mays putative cytochrome P450 superfamily protein (LOC100383167), mRNA	NA	coding protein	psRNATarget
NM_001175121.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*|||||||||||||=||||* targets:1916   CACUUAGGGCUUGUUUGGUUU   1936 Target Full Sequence	2.5	Zea mays UDP-glycosyltransferase 83A1 (LOC100382376), mRNA	NA	coding protein	psRNATarget
BT064093.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*|||||||||||||=||||* targets:1916   CACUUAGGGCUUGUUUGGUUU   1936 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0137J11 mRNA, complete cds	NA	coding protein	psRNATarget
BT018903.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   =*||||-||||||||||||||| targets:1935   UCCUUAAGGGCUUGUUCGGUUA   1956 Target Full Sequence	2.0	Zea mays clone EL01T0208C03.d mRNA sequence	NA	coding protein	psRNATarget
EU975659.1	ncRNA:21   GCGAA--UCCCGAACAAGCCAAU   1   |*|||--|||||||||||||||| targets:2105   CCCUUGUAGGGCUUGUUCGGUUA   2127 Target Full Sequence	2.5	Zea mays clone 495563 ankyrin protein kinase-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158998.2	ncRNA:21   GCGAA--UCCCGAACAAGCCAAU   1   |*|||--|||||||||||||||| targets:2106   CCCUUGUAGGGCUUGUUCGGUUA   2128 Target Full Sequence	2.5	Zea mays Ankyrin protein kinase-like (LOC100279910), mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|*||||||||||||=||||| targets:808   GGGUUAGGGCUUGUUUGGUUA   828 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|*||||||||||||=||||| targets:808   GGGUUAGGGCUUGUUUGGUUA   828 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
HI406037.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|=|*|||||||||||||||= targets:4   UGUUGAGGGCUUGUUCGGUUG   24 Target Full Sequence	3.0	Sequence 4162 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238167.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|=|*|||||||||||||||= targets:4   UGUUGAGGGCUUGUUCGGUUG   24 Target Full Sequence	3.0	Sequence 4162 from Patent EP2985353	NA	coding protein	psRNATarget
JB166498.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =|=|*|||||||||||||||= targets:4   UGUUGAGGGCUUGUUCGGUUG   24 Target Full Sequence	3.0	Sequence 4162 from Patent EP2559767	NA	coding protein	psRNATarget
JB163448.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||*|||||||||||||||| targets:5   CACUAAGGGCUUGUUCGGUUA   25 Target Full Sequence	1.0	Sequence 1112 from Patent EP2559767	NA	coding protein	psRNATarget
HI402987.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||*|||||||||||||||| targets:5   CACUAAGGGCUUGUUCGGUUA   25 Target Full Sequence	1.0	Sequence 1112 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235117.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||*|||||||||||||||| targets:5   CACUAAGGGCUUGUUCGGUUA   25 Target Full Sequence	1.0	Sequence 1112 from Patent EP2985353	NA	coding protein	psRNATarget
BT017593.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*|||||||||||||||*||| targets:372   CCCUUAGGGCUUGUUCGUUUA   392 Target Full Sequence	1.5	Zea mays clone EL01N0430H01.c mRNA sequence	NA	coding protein	psRNATarget
EU942557.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||*|||||||||||||||| targets:474   CUCUAAGGGCUUGUUCGGUUA   494 Target Full Sequence	1.0	Zea mays clone 1517970 mRNA sequence	NA	coding protein	psRNATarget
BT062183.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*||*|||||||||||||||| targets:153   CACUAAGGGCUUGUUCGGUUA   173 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008661692.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X18, mRNA	NA	coding protein	psRNATarget
XM_008661691.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X17, mRNA	NA	coding protein	psRNATarget
XM_008661689.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_020544136.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X13, mRNA	NA	coding protein	psRNATarget
XM_020544139.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X16, mRNA	NA	coding protein	psRNATarget
XM_020544133.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_008654724.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |||||||**|||||||||||| targets:3285   CGCUUAGAACUUGUUCGGUUA   3305 Target Full Sequence	2.5	PREDICTED: Zea mays flowering time control protein FPA (LOC103633041), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020544131.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020544137.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X14, mRNA	NA	coding protein	psRNATarget
XM_020544135.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X12, mRNA	NA	coding protein	psRNATarget
XM_020544134.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X11, mRNA	NA	coding protein	psRNATarget
XM_020544132.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020544126.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544125.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544130.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020544127.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020544129.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   ***||||||||||||=||||| targets:2211   AAAUUAGGGCUUGUUUGGUUA   2231 Target Full Sequence	2.5	PREDICTED: Zea mays protein transport protein sec31 (LOC103638902), transcript variant X5, mRNA	NA	coding protein	psRNATarget
JB166283.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:136   GCCUAAGGGCUUGUUCGGUUA   156 Target Full Sequence	1.0	Sequence 3947 from Patent EP2559767	NA	coding protein	psRNATarget
HI405822.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:136   GCCUAAGGGCUUGUUCGGUUA   156 Target Full Sequence	1.0	Sequence 3947 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237952.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:136   GCCUAAGGGCUUGUUCGGUUA   156 Target Full Sequence	1.0	Sequence 3947 from Patent EP2985353	NA	coding protein	psRNATarget
EZ064016.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:26   AUCUCAGGGCUUGUUCGGUUA   46 Target Full Sequence	1.0	TSA: Zea mays contig65139, mRNA sequence	NA	coding protein	psRNATarget
EU944907.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||*|||||||||||||||| targets:245   UCCUAAGGGCUUGUUCGGUUA   265 Target Full Sequence	1.0	Zea mays clone 235115 mRNA sequence	NA	coding protein	psRNATarget
EU942632.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:161   CAUUUAAGGGCUUGUUCGGUUA   182 Target Full Sequence	3.0	Zea mays clone 1525411 mRNA sequence	NA	coding protein	psRNATarget
EU962625.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||||*|||||||||||| targets:514   AACUUAGGCCUUGUUCGGUUA   534 Target Full Sequence	1.5	Zea mays clone 244290 mRNA sequence	NA	coding protein	psRNATarget
EU951439.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||||||||||*|||| targets:88   UACUUAGGGCUUGUUCAGUUA   108 Target Full Sequence	1.5	Zea mays clone 701891 mRNA sequence	NA	coding protein	psRNATarget
AY104367.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:606   AACUCAGGGCUUGUUCGGUUA   626 Target Full Sequence	1.0	Zea mays PCO134486 mRNA sequence	NA	coding protein	psRNATarget
EU946280.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:594   AACUAAGGGCUUGUUCGGUUA   614 Target Full Sequence	1.0	Zea mays clone 303329 mRNA sequence	NA	coding protein	psRNATarget
EU946469.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:682   AACUCAGGGCUUGUUCGGUUA   702 Target Full Sequence	1.0	Zea mays clone 313172 mRNA sequence	NA	coding protein	psRNATarget
AY111036.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||||*|||||||||||||| targets:79   ACCUUAAGGCUUGUUCGGUUA   99 Target Full Sequence	1.0	Zea mays CL1582_4 mRNA sequence	NA	coding protein	psRNATarget
EU948930.1	ncRNA:21   GCGAA---UCCCGAACAAGCCAAU   1   **|||---|||||||||||||||| targets:309   GUCUUGUAAGGGCUUGUUCGGUUA   332 Target Full Sequence	3.0	Zea mays clone 390579 mRNA sequence	NA	coding protein	psRNATarget
NM_001291617.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:673   AACUCAGGGCUUGUUCGGUUA   693 Target Full Sequence	1.0	Zea mays enhancer of rudimentary-like protein (LOC100383755), mRNA	NA	coding protein	psRNATarget
BT068211.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:673   AACUCAGGGCUUGUUCGGUUA   693 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0077D08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008665263.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*||||||*|||||||||||| targets:166   UUCUUAGGCCUUGUUCGGUUA   186 Target Full Sequence	1.5	PREDICTED: Zea mays calcium-binding protein PBP1 (LOC103641962), mRNA	NA	coding protein	psRNATarget
BT062922.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:829   AGCUGAGGGCUUGUUCGGUUC   849 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0007N17 mRNA, complete cds	NA	coding protein	psRNATarget
EU959055.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:777   AGCUGAGGGCUUGUUCGGUUY   797 Target Full Sequence	2.0	Zea mays clone 209821 mRNA sequence	NA	coding protein	psRNATarget
EU959053.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:775   AGCUGAGGGCUUGUUCGGUUC   795 Target Full Sequence	2.0	Zea mays clone 209789 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
EU959258.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:775   AGCUGAGGGCUUGUUCGGUUC   795 Target Full Sequence	2.0	Zea mays clone 213262 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
EU959345.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:776   AGCUGAGGGCUUGUUCGGUUC   796 Target Full Sequence	2.0	Zea mays clone 217290 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product	NA	coding protein	psRNATarget
BT087300.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*|||||*||||||||||||| targets:917   UACUUAGUGCUUGUUCGGUUA   937 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0032O11 mRNA, complete cds	NA	coding protein	psRNATarget
AY109813.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **|||||||||||||||*||| targets:1196   ACCUUAGGGCUUGUUCGUUUA   1216 Target Full Sequence	1.5	Zea mays CL4777_1 mRNA sequence	NA	coding protein	psRNATarget
EU963259.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:916   AACUCAGGGCUUGUUCGGUUA   936 Target Full Sequence	1.0	Zea mays clone 259966 enhancer of rudimentary mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647186.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*|||||*||||||||||||| targets:950   UACUUAGUGCUUGUUCGGUUA   970 Target Full Sequence	1.0	PREDICTED: Zea mays B3 domain-containing protein (LOC100192994), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU970241.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **|||||||||||||||*||| targets:1028   ACCUUAGGGCUUGUUCGUUUA   1048 Target Full Sequence	1.5	Zea mays clone 342550 mRNA sequence	NA	coding protein	psRNATarget
BT069908.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:166   ACCUCAGGGCUUGUUCGGUUA   186 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0320O20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176906.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:166   ACCUCAGGGCUUGUUCGGUUA   186 Target Full Sequence	1.0	Zea mays uncharacterized LOC100384359 (LOC100384359), mRNA	NA	coding protein	psRNATarget
XM_008666525.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   *|||*|||||||||||||||* targets:848   AGCUGAGGGCUUGUUCGGUUC   868 Target Full Sequence	2.0	PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM23-1 (LOC100282051), mRNA	NA	coding protein	psRNATarget
BT035134.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*|||||*||||||||||||| targets:1112   UACUUAGUGCUUGUUCGGUUA   1132 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0041I21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138165.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   =*|||||*||||||||||||| targets:1112   UACUUAGUGCUUGUUCGGUUA   1132 Target Full Sequence	1.0	Zea mays B3 domain-containing protein (LOC100192994), mRNA	NA	coding protein	psRNATarget
BT068791.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:1248   CAUUUAAGGGCUUGUUCGGUUA   1269 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0382D13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020541453.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:1938   AACUAAGGGCUUGUUCGGUUA   1958 Target Full Sequence	1.0	PREDICTED: Zea mays DNA-(apurinic or apyrimidinic site) lyase 2 (LOC103633096), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_008654777.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:2307   AACUAAGGGCUUGUUCGGUUA   2327 Target Full Sequence	1.0	PREDICTED: Zea mays DNA-(apurinic or apyrimidinic site) lyase 2 (LOC103633096), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008654776.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:2505   AACUAAGGGCUUGUUCGGUUA   2525 Target Full Sequence	1.0	PREDICTED: Zea mays DNA-(apurinic or apyrimidinic site) lyase 2 (LOC103633096), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008654775.2	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   **||*|||||||||||||||| targets:2507   AACUAAGGGCUUGUUCGGUUA   2527 Target Full Sequence	1.0	PREDICTED: Zea mays DNA-(apurinic or apyrimidinic site) lyase 2 (LOC103633096), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546135.1	ncRNA:21   GCGAA---UCCCGAACAAGCCAAU   1   **|||---|||||||||||||||| targets:3021   GUCUUGUAAGGGCUUGUUCGGUUA   3044 Target Full Sequence	3.0	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546136.1	ncRNA:21   GCGAA---UCCCGAACAAGCCAAU   1   **|||---|||||||||||||||| targets:3168   GUCUUGUAAGGGCUUGUUCGGUUA   3191 Target Full Sequence	3.0	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103642139), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008648200.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:4238   CAUUUAAGGGCUUGUUCGGUUA   4259 Target Full Sequence	3.0	PREDICTED: Zea mays CLIP-associated protein (LOC103627891), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008648199.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:4243   CAUUUAAGGGCUUGUUCGGUUA   4264 Target Full Sequence	3.0	PREDICTED: Zea mays CLIP-associated protein (LOC103627891), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008648198.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:4335   CAUUUAAGGGCUUGUUCGGUUA   4356 Target Full Sequence	3.0	PREDICTED: Zea mays CLIP-associated protein (LOC103627891), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008648197.2	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   |*=|||-||||||||||||||| targets:4339   CAUUUAAGGGCUUGUUCGGUUA   4360 Target Full Sequence	3.0	PREDICTED: Zea mays CLIP-associated protein (LOC103627891), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001348011.1	ncRNA:21   GCGAAUCCCGAACAAGCCAAU   1   |*=||=||||||||||||||* targets:348   CCUUUGGGGCUUGUUCGGUUC   368 Target Full Sequence	3.0	Zea mays hypothetical protein (LOC100277538), mRNA	NA	coding protein	psRNATarget
XM_020542872.1	ncRNA:21   GCGAAU-CCCGAACAAGCCAAU   1   =*|||=-||||||||||||||| targets:1260   UUCUUGCGGGCUUGUUCGGUUA   1281 Target Full Sequence	3.0	PREDICTED: Zea mays LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 (LOC103634808), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ101889.1	ncRNA:20   CGAAU-CCCGAACAAGCCAAU   1   |*|||-||||||||||||||| targets:1   GGUUACGGGCUUGUUCGGUUA   21 Target Full Sequence	3.0	TSA: Zea mays contig37545, mRNA sequence	NA	coding protein	psRNATarget