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BaseInfo

ncRNA ID	novel_zma_miR4927
Species	Zea mays
Class	miRNA
Genome position	Chr2:178301601-178301700 [+]
Reference genome	RefGen_v4
Source	SRR2287163;SRR2287164
Length	24
Mature sequence(if miRNA)	1 - UGAGUGGAUUGAGGGGGAUUGGAG - 24
Stem-loop(if miRNA)	---U                                             A     GAGUGGAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUAC A     ||||||||||||||||||||||||||||||||||||||||||||| U     CUCACCUAACUCCCCCUAACCUCCCCUAAUUUAGGGGAGGAUAUG U AAAC                                             U
Stem-loop sequence	UGAGUGGAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACAAUUUGUAUAGGAGGGGAUUUAAUCCCCUCCAAUCCCCCUCAAUCCACUCCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067503.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUG-AGU   1   |||||||||||||||||||||-||| targets:1598   CUCCAAUCCCCCUCAAUCCACCUCA   1622 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUG-AGU   1   |||||||||||||||||||||-||| targets:1598   CUCCAAUCCCCCUCAAUCCACCUCA   1622 Target Full Sequence	3.0	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
XM_020552749.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGAGU   1   |||||||||||||||||||||*|* targets:3277   CUCCAAUCCCCCUCAAUCCACCCC   3300 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_020547043.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGAGU   1   *|===||||||||||||||*|||* targets:3169   AUUUGAUCCCCCUCAAUCCCCUCC   3192 Target Full Sequence	2.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103644317), transcript variant X1, mRNA	NA	coding protein	psRNATarget