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BaseInfo

ncRNA ID	novel_zma_miR4926
Species	Zea mays
Class	miRNA
Genome position	Chr4:170416323-170416454 [-]
Reference genome	RefGen_v4
Source	SRR1618882
Length	24
Mature sequence(if miRNA)	1 - CACUUGGAUGAGAAACGAAGGCAC - 24
Stem-loop(if miRNA)	--      A             GG    --     --- -- A  G  ACAUAGAAGAGACAGGUGGAGC   GCCUUC UUUCUCAUCCAGG  GUGA  GGGCA   G  C GU GC                      G   |||||| |||||||||||||  ||||  |||||   |  | || ||                      G   CGGAAG AAAGAGUAGGUUC  CACU  UCUGU   G  U CA AG                      C CA      C             -A    UA     AAA GA -  A  AAAAUACACUGUGGGAACAACG
Stem-loop sequence	GCCUUCAUUUCUCAUCCAGGGGGUGAGGGCAGCAGUGGCACAUAGAAGAGACAGGUGGAGCGGCGCAACAAGGGUGUCACAUAAAAGAAACUAGGAAAUGUCUAUUCACACUUGGAUGAGAAACGAAGGCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020544412.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   ||||||||*|||||=||||||||| targets:1672   GUGCCUUCAUUUCUUAUCCAAGUG   1695 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103640402 (LOC103640402), mRNA	NA	coding protein	psRNATarget
BT016654.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||||||=||||||||||| targets:848   GAUCCUUCGUUUUUCAUCCAAGUG   871 Target Full Sequence	1.5	Zea mays clone Contig487 mRNA sequence	NA	coding protein	psRNATarget
BT087533.2	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   ||||*|||*||||||||=|||||| targets:975   GUGCAUUCAUUUCUCAUUCAAGUG   998 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0103K23 mRNA, complete cds	NA	coding protein	psRNATarget
BT017211.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||*|||=||||||||||| targets:532   GAUCCUUCCUUUUUCAUCCAAGUG   555 Target Full Sequence	2.5	Zea mays clone EL01N0372B08.c mRNA sequence	NA	coding protein	psRNATarget
EU973820.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||*|||=||||||||||| targets:561   GAUCCUUCCUUUUUCAUCCAAGUG   584 Target Full Sequence	2.5	Zea mays clone 418506 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT086619.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||*|||=||||||||||| targets:1002   GAUCCUUCCUUUUUCAUCCAAGUG   1025 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0192D13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148739.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||*|||=||||||||||| targets:1420   GAUCCUUCCUUUUUCAUCCAAGUG   1443 Target Full Sequence	2.5	Zea mays uncharacterized LOC100274379 (LOC100274379), mRNA	NA	coding protein	psRNATarget
BT042893.1	ncRNA:24   CACGGAAGCAAAGAGUAGGUUCAC   1   |**|||||*|||=||||||||||| targets:1420   GAUCCUUCCUUUUUCAUCCAAGUG   1443 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0059G09 mRNA, complete cds	NA	coding protein	psRNATarget