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BaseInfo

ncRNA ID	novel_zma_miR4925
Species	Zea mays
Class	miRNA
Genome position	Chr1:120133782-120133864 [+]
Reference genome	RefGen_v4
Source	SRR2287163
Length	24
Mature sequence(if miRNA)	60 - AAAAGUACUCGGCAAAGAAGGUUU - 83
Stem-loop(if miRNA)	-GC                 ----  C U             C    UUUUCUUUGCCGAGUGC    UC C GGCACUCGGCAAA C    |||||||||||||||||    || | |||||||||||||    GGAAGAAACGGCUCAUG    AG G CCGUGAGCCGUUU U UUU                 AAAA  A C             C
Stem-loop sequence	GCUUUUCUUUGCCGAGUGCUCCCUGGCACUCGGCAAACCUCUUUGCCGAGUGCCCGAGAAAAAGUACUCGGCAAAGAAGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167714.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   ||=||||||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	0.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   ||=||||||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	0.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
HI407253.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   ||=||||||||||||||||||||| targets:29   AAGCCUUCUUUGCCGAGUACUUUU   52 Target Full Sequence	0.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   UUUG--GAAGAAACGGCUCAUGAAAA   1   *|||--|||||||||||||||||||| targets:440   UAACAGCUUCUUUGCCGAGUACUUUU   465 Target Full Sequence	0.0	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   **=||||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   **=||||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   UUUGGAAGAAACGGCUCAUGAAAA   1   **=||||||||||||||||||*|* targets:95   CUGCCUUCUUUGCCGAGUACUAUG   118 Target Full Sequence	2.5	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
EU957858.1	ncRNA:24   UUUG--GAAGAAACGGCUCAUGAAAA   1   *|||--|||*|||*|||||||||||| targets:1234   CAACGGCUUAUUUACCGAGUACUUUU   1259 Target Full Sequence	2.5	Zea mays clone 1627310 mRNA sequence	NA	coding protein	psRNATarget