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BaseInfo

ncRNA ID novel_zma_miR4923
Species Zea mays
Class miRNA
Genome position Chr1:102264426-102264490 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 22
Mature sequence(if miRNA) 1 - UUUGUUAGAUCAAAAGGGCAUA - 22
Stem-loop(if miRNA) --    UU -           --CAU     UUU
  UUUG  A GAUCAAAAGGG     ACCAC   C
  ||||  | |||||||||||     |||||
  GAAU  U CUAGUUUUCUU     UGGUG   A
AG    GG U           UAUUC     UGU
Stem-loop sequence UUUGUUAGAUCAAAAGGGCAUACCACUUUCAUGUGUGGUCUUAUUUCUUUUGAUCUUGGUAAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT041946.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:1402   UCAGUACUUUUGAUCUAACAAA   1423

2.0 Zea mays full-length cDNA clone ZM_BFb0084K20 mRNA, complete cds NA coding protein psRNATarget
NM_001148260.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:1402   UCAGUACUUUUGAUCUAACAAA   1423

2.0 Zea mays Chloride conductance regulatory protein ICln (pco111553), mRNA NA coding protein psRNATarget
AY105208.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:1044   UCAGUACUUUUGAUCUAACAAA   1065

2.0 Zea mays PCO111553 mRNA sequence NA coding protein psRNATarget
BT087365.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:1058   UCAGUACUUUUGAUCUAACAAA   1079

2.0 Zea mays full-length cDNA clone ZM_BFb0055B24 mRNA, complete cds NA coding protein psRNATarget
EU960862.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:1048   UCAGUACUUUUGAUCUAACAAA   1069

2.0 Zea mays clone 229141 mRNA sequence NA coding protein psRNATarget
EU951457.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:661   UCAGUACUUUUGAUCUAACAAA   682

2.0 Zea mays clone 702026 mRNA sequence NA coding protein psRNATarget
BT069832.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:461   UCAGUACUUUUGAUCUAACAAA   482

2.0 Zea mays full-length cDNA clone ZM_BFb0293P13 mRNA, complete cds NA coding protein psRNATarget
EZ079545.1
ncRNA:22   AUACGGGAAAACUAGAUUGUUU   1
  |**|=*||||||||||||||||
targets:61   UCAGUACUUUUGAUCUAACAAA   82

2.0 TSA: Zea mays contig15184, mRNA sequence NA coding protein psRNATarget