Search result

BaseInfo

ncRNA ID osa-miRf10089-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UCCGUCCCAUAAUGUUGCAAC - NA
Stem-loop(if miRNA)      C      C                         UAUA      UGUAUGUCCAGA
UACUC CUCCGU CCAUAAUGUUGCAACCUAGGAUGGG    UGGACA            U
||||| |||||| |||||||||||||||||||||||||    ||||||            U
AUGAG GAGGCA GGUAUUACAACGUUGGAUCCUACCC    CUGGGU            C
     A      A                         UACU      AGGAUGCUGAUG
Stem-loop sequence UACUCCCUCCGUCCCAUAAUGUUGCAACCUAGGAUGGGUAUAUGGACAUGUAUGUCCAGAUUCGUAGUCGUAGGAUGGGUCUCAUCCCAUCCUAGGUUGCAACAUUAUGGAACGGAGAGAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164201.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  ||*||||||||*|||||||||
targets:101   GUAGCAACAUUUUGGGACGGA   121

2.5 Sequence 1865 from Patent EP2559767 NA coding protein psRNATarget
HI403740.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  ||*||||||||*|||||||||
targets:101   GUAGCAACAUUUUGGGACGGA   121

2.5 Sequence 1865 from Patent EP2074227 NA coding protein psRNATarget
LQ235870.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  ||*||||||||*|||||||||
targets:101   GUAGCAACAUUUUGGGACGGA   121

2.5 Sequence 1865 from Patent EP2985353 NA coding protein psRNATarget
HI403973.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  *|||=*|=|||||||||||||
targets:127   AUUGUUAUAUUAUGGGACGGA   147

3.0 Sequence 2098 from Patent EP2074227 NA coding protein psRNATarget
LQ236103.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  *|||=*|=|||||||||||||
targets:127   AUUGUUAUAUUAUGGGACGGA   147

3.0 Sequence 2098 from Patent EP2985353 NA coding protein psRNATarget
JB164434.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  *|||=*|=|||||||||||||
targets:127   AUUGUUAUAUUAUGGGACGGA   147

3.0 Sequence 2098 from Patent EP2559767 NA coding protein psRNATarget
AK064579.1
ncRNA:21   CAACGUUGUAAUACCCUGCCU   1
  *|||=*|=|||||||||||||
targets:1091   AUUGUUAUAUUAUGGGACGGA   1111

3.0 Oryza sativa Japonica Group cDNA clone:002-112-E11, full insert sequence NA coding protein psRNATarget