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BaseInfo

ncRNA ID novel_zma_miR4911
Species Zea mays
Class miRNA
Genome position Chr1:162869969-162870042 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 22
Mature sequence(if miRNA) 53 - UAAGCUUAUGUCCGACGGCCUU - 74
Stem-loop(if miRNA) --               C     UCAGA  UUAUG      G
  UAAGCUUAUGUCCGA GGCCU     GC     UCUGAC G
  ||||||||||||||| |||||     ||     ||||||
  AUUCGAAUACAGGCU CCGGA     CG     AGACUG U
GU               A     -----  -----      C
Stem-loop sequence UAAGCUUAUGUCCGACGGCCUUCAGAGCUUAUGUCUGACGGUCGUCAGAGCAGGCCAUCGGACAUAAGCUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167420.1
ncRNA:20   CCGGCAGCCUGUAUUCGAAU   1
  ||*|||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUA   20

1.0 Sequence 5084 from Patent EP2559767 NA coding protein psRNATarget
LQ239089.1
ncRNA:20   CCGGCAGCCUGUAUUCGAAU   1
  ||*|||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUA   20

1.0 Sequence 5084 from Patent EP2985353 NA coding protein psRNATarget
HI406959.1
ncRNA:20   CCGGCAGCCUGUAUUCGAAU   1
  ||*|||||||||||||||||
targets:1   GGACGUCGGACAUAAGCUUA   20

1.0 Sequence 5084 from Patent EP2074227 NA coding protein psRNATarget
HI402927.1
ncRNA:22   UUCCGGCAGCCUGUAUUCGAAU   1
  ||*||||||||||||||||*|*
targets:9   AAAGCCGUCGGACAUAAGCCUC   30

2.5 Sequence 1052 from Patent EP2074227 NA coding protein psRNATarget
JB163388.1
ncRNA:22   UUCCGGCAGCCUGUAUUCGAAU   1
  ||*||||||||||||||||*|*
targets:9   AAAGCCGUCGGACAUAAGCCUC   30

2.5 Sequence 1052 from Patent EP2559767 NA coding protein psRNATarget
LQ235057.1
ncRNA:22   UUCCGGCAGCCUGUAUUCGAAU   1
  ||*||||||||||||||||*|*
targets:9   AAAGCCGUCGGACAUAAGCCUC   30

2.5 Sequence 1052 from Patent EP2985353 NA coding protein psRNATarget