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BaseInfo

ncRNA ID osa-miRf10087-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - GUCGAACUGCGGUAGUUCGACAGGU - NA
Stem-loop(if miRNA) U    -    CUA      A    UG        A      -        AA
 UUAG CACC   UCGAAC ACCG  GUUCGACA GGUACC UAUCGAAC  C
 |||| ||||   |||||| ||||  |||||||| |||||| ||||||||  C
 AAUU GUGG   AGCUUG UGGC  CAAGCUGU CCAUGG AUAGCUUG  A
A    A    -AC      A    GU        -      G        AC
Stem-loop sequence UUUAGCACCCUAUCGAACAACCGUGGUUCGACAAGGUACCUAUCGAACAACCACAGUUCGAUAGGGUACCUGUCGAACUGCGGUAGUUCGACAGGUGAUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288371.1
ncRNA:25   UGGACAGCUUGAUGGCGUCAAGCUG   1
  *||||||||||*|||||||||||||
targets:346   CCCUGUCGAACAACCGCAGUUCGAC   370

1.0 Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence NA coding protein psRNATarget
AK288371.1
ncRNA:25   UGGACAGCUUGAUGGCGUCAAGCUG   1
  *||||||||||*|||*|||||||||
targets:106   CCCUGUCGAACAACCACAGUUCGAC   130

2.5 Oryza sativa Japonica Group cDNA, clone: J090026F03, full insert sequence NA coding protein psRNATarget
AK288290.1
ncRNA:25   UGGACAGCUUGAUGGCGUCAAGCUG   1
  *=||||=||||*|||||||||||||
targets:2062   CUCUGUUGAACAACCGCAGUUCGAC   2086

2.0 Oryza sativa Japonica Group cDNA, clone: J090019D06, full insert sequence NA coding protein psRNATarget