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BaseInfo

ncRNA ID	novel_zma_miR4898
Species	Zea mays
Class	miRNA
Genome position	Chr1:264397854-264397929 [+]
Reference genome	RefGen_v4
Source	SRR2287163;SRR2287164
Length	21
Mature sequence(if miRNA)	1 - AGUGAGGGGGAUUGGAGGGGA - 21
Stem-loop(if miRNA)	--AG                                UA     UGAGGGGGAUUGGAGGGGAUUGAGGGGGAAAU  G     ||||||||||||||||||||||||||||||||     ACUCUCCCUAACCUCCCCUAACUCCCUCUUUA  U CUUA                                CU
Stem-loop sequence	AGUGAGGGGGAUUGGAGGGGAUUGAGGGGGAAAUUAGUUCAUUUCUCCCUCAAUCCCCUCCAAUCCCUCUCAAUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   |||||||||||||||||||*| targets:3273   UCCCCUCCAAUCCCCCUCAAU   3293 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   |||||||||||||||||||*| targets:1594   UCCCCUCCAAUCCCCCUCAAU   1614 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   |||||||||||||||||||*| targets:1594   UCCCCUCCAAUCCCCCUCAAU   1614 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
EZ083462.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   ||||=||||||||||||||*| targets:33   UCCCUUCCAAUCCCCCUCAAU   53 Target Full Sequence	2.5	TSA: Zea mays contig19106, mRNA sequence	NA	coding protein	psRNATarget
XM_020551510.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   *||||||||||||||||||*| targets:1568   ACCCCUCCAAUCCCCCUCAAU   1588 Target Full Sequence	1.5	PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT061531.2	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   *|||||=||||||||||||*| targets:843   ACCCCUUCAAUCCCCCUCAAU   863 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020547439.1	ncRNA:21   AGGGGAGGUUAGGGGGAGUGA   1   |||*|||||||||||||||*| targets:3921   UCCACUCCAAUCCCCCUCAAU   3941 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100194067), transcript variant X1, mRNA	NA	coding protein	psRNATarget