Search result

BaseInfo

ncRNA ID novel_zma_miR4895
Species Zea mays
Class miRNA
Genome position Chr3:226544060-226544131 [-]
Reference genome RefGen_v4
Source SRR1618882
Length 24
Mature sequence(if miRNA) 1 - AUAAUACCGUAGUUUUGAAAACUG - 24
Stem-loop(if miRNA) --     UG    -  UA       CU   - U   G
  GUUUU  AAAU AC  UAUUAUA  UUA G UAU A
  |||||  |||| ||  |||||||  ||| | |||
  CAAAA  UUUG UG  AUAAUAU  GAU C AUA C
GU     GU    A  CC       UU   G C   A
Stem-loop sequence GUUUUUGAAAUACUAUAUUAUACUUUAGUUAUGACAAUACCGUAGUUUAUAAUACCGUAGUUUUGAAAACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008653629.2
ncRNA:24   GUCAAAAGUUUUGAUGCCAUAAUA   1
  =|||||||||||||=|||||||||
targets:2160   UAGUUUUCAAAACUGCGGUAUUAU   2183

1.5 PREDICTED: Zea mays ribosomal protein S6 kinase (S6K), transcript variant X1, mRNA NA coding protein psRNATarget