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BaseInfo

ncRNA ID novel_zma_miR4891
Species Zea mays
Class miRNA
Genome position Chr9:6442222-6442285 [+]
Reference genome RefGen_v4
Source SRR2287163;SRR1997866
Length 24
Mature sequence(if miRNA) 1 - CAUAGCACUCGACAAAGAAGACAC - 24
Stem-loop(if miRNA) --           AC        CAC   UAG
  CAUAGCACUCG  AAAGAAGA   ACC   G
  |||||||||||  ||||||||   |||
  GUGUUGUGAGC  UUUCUUCU   UGG   A
CU           CA        AAA   UCA
Stem-loop sequence CAUAGCACUCGACAAAGAAGACACACCUAGGAACUGGUAAAUCUUCUUUACCGAGUGUUGUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167528.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
LQ239197.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget
HI407067.1
ncRNA:24   CACAGAAGAAACAGCUCACGAUAC   1
  |**||*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget