Search result

BaseInfo

ncRNA ID	novel_zma_miR4881
Species	Zea mays
Class	miRNA
Genome position	Chr8:136987591-136987731 [+]
Reference genome	RefGen_v4
Source	SRR2287163
Length	24
Mature sequence(if miRNA)	118 - AACGAGUAUGAAUUUAAGCACGCA - 141
Stem-loop(if miRNA)	--           C                                           CUCCUAAUCA   A   CGUGCUUAAAU CGUACUCGUUGUCGAGCAGAAUAUAAACACCUGGGGUGUUACA          UUC U   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||   GCACGAAUUUA GUAUGAGCAACAGCUCGUCUUAUAUUUGUGGACCCCACAAUGU          GAG A AC           A                                           -UCCACACCG   A
Stem-loop sequence	CGUGCUUAAAUCCGUACUCGUUGUCGAGCAGAAUAUAAACACCUGGGGUGUUACACUCCUAAUCAUUCAUAAGAGGCCACACCUUGUAACACCCCAGGUGUUUAUAUUCUGCUCGACAACGAGUAUGAAUUUAAGCACGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170096.1	ncRNA:24   ACGCACGAAUUUAAGUAUGAGCAA   1   |*|||||||||||*|||||||||| targets:84   UACGUGCUUAAAUCCAUACUCGUU   107 Target Full Sequence	1.5	Sequence 7760 from Patent EP2559767	NA	coding protein	psRNATarget
HI409635.1	ncRNA:24   ACGCACGAAUUUAAGUAUGAGCAA   1   |*|||||||||||*|||||||||| targets:84   UACGUGCUUAAAUCCAUACUCGUU   107 Target Full Sequence	1.5	Sequence 7760 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241765.1	ncRNA:24   ACGCACGAAUUUAAGUAUGAGCAA   1   |*|||||||||||*|||||||||| targets:84   UACGUGCUUAAAUCCAUACUCGUU   107 Target Full Sequence	1.5	Sequence 7760 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020545666.1	ncRNA:24   ACGCACGAAUUUAAGUAUGAGCAA   1   |*|||||||||||*|||||||||| targets:2299   UUCGUGCUUAAAUCCAUACUCGUU   2322 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109942995 (LOC109942995), mRNA	NA	coding protein	psRNATarget
XM_020538546.1	ncRNA:24   ACGCACGAAUUUAAGUAUGAGCAA   1   |*|*|||||||||*|||||||||| targets:2859   UACAUGCUUAAAUCCAUACUCGUU   2882 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109939961 (LOC109939961), mRNA	NA	coding protein	psRNATarget