ncRNA ID | novel_zma_miR4880 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:119335856-119335985 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287163 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAUUAGGGUAGGAUACGAGAUGA - 24 |
Stem-loop(if miRNA) |
--   -   G GU          A   -       --  ---      UAUCC   C  UUUUCAUCCC   ACA UUA G  AGGAUACGAG UGA CCCUGUA  UC   CGGCUG     GUC CG          U   ||| ||| |  |||||||||| ||| |||||||  ||   ||||||     ||| ||          A   UGU AGU C  UCCUGUGCUU AUU GGGACGU  AG   GCCGAC     CAG GC          C UU   C   G --          G   C       CA  ACU      UACUC   A  CACCUGCCGC |
Stem-loop sequence | ACAUUAGGGUAGGAUACGAGAUGACCCUGUAUCCGGCUGUAUCCGUCCCGUUUUCAUCCCUACCGCCGUCCACCGAGACCUCAUCAGCCGUCAGAACUGCAGGGCUUAGUUCGUGUCCUCGUGACUGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008647099.2 |
|
2.0 | PREDICTED: Zea mays uncharacterized protein (LOC103626711), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008675942.2 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103650349 (LOC103650349), mRNA | NA | coding protein | psRNATarget |