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BaseInfo

ncRNA ID novel_zma_miR4874
Species Zea mays
Class miRNA
Genome position Chr8:52558364-52558453 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 1 - CCUACAGUGUGGGAUGGAGGAUAA - 24
Stem-loop(if miRNA) --    C      -  AU  -       A       AUAGACUU    AAG
  CCUA AGUGUG GG  GG AGGAUAA UUGGAUC        GCGC   A
  |||| |||||| ||  || ||||||| |||||||        ||||
  GGAU UUACAC CC  CC UUUUAUU AGCUUAG        CGCG   U
GC    U      G  --  A       A       --------    CUU
Stem-loop sequence CCUACAGUGUGGGAUGGAGGAUAAAUUGGAUCAUAGACUUGCGCAAGAUUUCGCGCGAUUCGAAUUAUUUUACCCCGCACAUUUUAGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542644.1
ncRNA:24   AAUAGGAGGUAGGGUGUGACAUCC   1
  ||||||||||||||||||||||||
targets:222   UUAUCCUCCAUCCCACACUGUAGG   245

0.0 PREDICTED: Zea mays uncharacterized LOC103636822 (LOC103636822), mRNA NA coding protein psRNATarget