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BaseInfo

ncRNA ID novel_zma_miR4873
Species Zea mays
Class miRNA
Genome position Chr8:44754808-44754888 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 58 - GGGCUUAUUUUCGGCGGCGUCUGG - 81
Stem-loop(if miRNA) --                  A           CA      
  AGACGCCGCCGAAAAUAA CCCUUUGCCGC  AAAAUAG
  |||||||||||||||||| |||||||||||  ||||||C
  UCUGCGGCGGCUUUUAUU GGGAAACGGCG  UUUUAUU
GG                  C           AC      
Stem-loop sequence AGACGCCGCCGAAAAUAAACCCUUUGCCGCCAAAAAUAGCUUAUUUUCAGCGGCAAAGGGCUUAUUUUCGGCGGCGUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407204.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
LQ239334.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget
JB167665.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget