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BaseInfo

ncRNA ID novel_zma_miR4865
Species Zea mays
Class miRNA
Genome position Chr8:107719934-107719996 [+]
Reference genome RefGen_v4
Source SRR1583941;SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647389;SRR2647467;SRR1583942
Length 22
Mature sequence(if miRNA) 1 - UUUUUCGAUCUACUUUGCAACU - 22
Stem-loop(if miRNA) --         C     U  --AA     AUA
  UUUUUCGAU UACUU GC    CUGAC   G
  ||||||||| ||||| ||    |||||   U
  GAAAAGCUA AUGAA CG    GACUG   C
GG         A     C  AUGA     AGU
Stem-loop sequence UUUUUCGAUCUACUUUGCAACUGACAUAGUCUGAGUCAGAGUAGCCAAGUAAAUCGAAAAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169895.1
ncRNA:22   UCAACGUUUCAUCUAGCUUUUU   1
  =|||||||||||||||*|||||
targets:216   GGUUGCAAAGUAGAUCAAAAAA   237

1.5 Sequence 7559 from Patent EP2559767 NA coding protein psRNATarget
HI409434.1
ncRNA:22   UCAACGUUUCAUCUAGCUUUUU   1
  =|||||||||||||||*|||||
targets:216   GGUUGCAAAGUAGAUCAAAAAA   237

1.5 Sequence 7559 from Patent EP2074227 NA coding protein psRNATarget
LQ241564.1
ncRNA:22   UCAACGUUUCAUCUAGCUUUUU   1
  =|||||||||||||||*|||||
targets:216   GGUUGCAAAGUAGAUCAAAAAA   237

1.5 Sequence 7559 from Patent EP2985353 NA coding protein psRNATarget