ncRNA ID | osa-miRf10083-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - UAGGACCCACGUAGGCCCCACAUGU - NA |
Stem-loop(if miRNA) |
     A            A                 AAGAGAGA    GAU UCAGC UAGGACCCACGU GGCCCCACAUGUUAGGA        GGGU   G ||||| |||||||||||| |||||||||||||||||        |||| AGUCG AUCUUGGGUGCA CCGGGGUGUACAAUCCU        CCCG   G      C            C                 --------    UAC |
Stem-loop sequence | UCAGCAUAGGACCCACGUAGGCCCCACAUGUUAGGAAAGAGAGAGGGUGAUGGCAUGCCCUCCUAACAUGUGGGGCCCACGUGGGUUCUACGCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015785887.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342042 (LOC4342042), mRNA | uncharacterized LOC4342042(LOC4342042) | coding protein | psRNATarget | |||||||||
XM_015788110.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281423 (LOC107281423), mRNA | uncharacterized LOC107281423(LOC107281423) | coding protein | psRNATarget | |||||||||
AK119967.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-184-D11, full insert sequence | NA | coding protein | psRNATarget |