Search result

BaseInfo

ncRNA ID osa-miRf10083-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UAGGACCCACGUAGGCCCCACAUGU - NA
Stem-loop(if miRNA)      A            A                 AAGAGAGA    GAU
UCAGC UAGGACCCACGU GGCCCCACAUGUUAGGA        GGGU   G
||||| |||||||||||| |||||||||||||||||        ||||
AGUCG AUCUUGGGUGCA CCGGGGUGUACAAUCCU        CCCG   G
     C            C                 --------    UAC
Stem-loop sequence UCAGCAUAGGACCCACGUAGGCCCCACAUGUUAGGAAAGAGAGAGGGUGAUGGCAUGCCCUCCUAACAUGUGGGGCCCACGUGGGUUCUACGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015785887.1
ncRNA:25   UGUACACCCCGGAUGCACCCAGGAU   1
  |||||||||||||||||||||||**
targets:93   ACAUGUGGGGCCUACGUGGGUCCAU   117

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342042 (LOC4342042), mRNA uncharacterized LOC4342042(LOC4342042) coding protein psRNATarget
XM_015788110.1
ncRNA:25   UGUACACCCCGGAUGCACCCAGGAU   1
  ||=|*|||||||*||||||||||||
targets:982   ACGUAUGGGGCCCACGUGGGUCCUA   1006

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281423 (LOC107281423), mRNA uncharacterized LOC107281423(LOC107281423) coding protein psRNATarget
AK119967.1
ncRNA:25   UGUACACCCCGGAUGCACCCAGGAU   1
  |||||*|||*||*||||||||||||
targets:1508   ACAUGGGGGUCCCACGUGGGUCCUA   1532

2.5 Oryza sativa Japonica Group cDNA clone:002-184-D11, full insert sequence NA coding protein psRNATarget