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BaseInfo

ncRNA ID	novel_zma_miR4855
Species	Zea mays
Class	miRNA
Genome position	Chr7:144506380-144506434 [-]
Reference genome	RefGen_v4
Source	SRR2287163
Length	21
Mature sequence(if miRNA)	35 - UCCCAAGUGGCACUCGGCAAU - 55
Stem-loop(if miRNA)	----UC   AG             U  U       CCA  UGGCACUCGGCAA GA G       |||  ||||||||||||| || G       GGU  GUCGUGAGCCGUU UU A ACAGAA   CA             U  U
Stem-loop sequence	UCCCAAGUGGCACUCGGCAAUGAUGGAUUUUUUGCCGAGUGCUGACUGGAAGACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI409785.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   *||||||||||||||*||||| targets:21   UUUGCCGAGUGCCACCUGGGA   41 Target Full Sequence	1.5	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   *||||||||||||||*||||| targets:21   UUUGCCGAGUGCCACCUGGGA   41 Target Full Sequence	1.5	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget
JB170246.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   *||||||||||||||*||||| targets:21   UUUGCCGAGUGCCACCUGGGA   41 Target Full Sequence	1.5	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008647569.2	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   =*|||=*=||||||||||||| targets:730   GCUGCUUGGUGCCACUUGGGA   750 Target Full Sequence	3.0	PREDICTED: Zea mays UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 (LOC103627281), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020538563.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   =*|||=*=||||||||||||| targets:735   GCUGCUUGGUGCCACUUGGGA   755 Target Full Sequence	3.0	PREDICTED: Zea mays UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 (LOC103627281), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020538566.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   =*|||=*=||||||||||||| targets:744   GCUGCUUGGUGCCACUUGGGA   764 Target Full Sequence	3.0	PREDICTED: Zea mays UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 (LOC103627281), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020538565.1	ncRNA:21   UAACGGCUCACGGUGAACCCU   1   =*|||=*=||||||||||||| targets:742   GCUGCUUGGUGCCACUUGGGA   762 Target Full Sequence	3.0	PREDICTED: Zea mays UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 (LOC103627281), transcript variant X3, mRNA	NA	coding protein	psRNATarget