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BaseInfo

ncRNA ID	osa-miRf10082-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CCCACGUGGGUUCUACGCUGAGUCA - NA
Stem-loop(if miRNA)	AC    A G     A            A                 AAGAGAGA    GAU CGUG  GGCU A UCAGC UAGGACCCACGU GGCCCCACAUGUUAGGA        GGGU   G ||||  |||| | ||||| |||||||||||| |||||||||||||||||        |||| GCAC  CCGA U AGUCG AUCUUGGGUGCA CCGGGGUGUACAAUCCU        CCCG   G     CA    C G     C            C                 --------    UAC
Stem-loop sequence	CGUGACGGCUAAGUCAGCAUAGGACCCACGUAGGCCCCACAUGUUAGGAAAGAGAGAGGGUGAUGGCAUGCCCUCCUAACAUGUGGGGCCCACGUGGGUUCUACGCUGAGUCAGCCACCACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015769095.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   |||||||||||=|=||||||||||| targets:251   UGACUCAGCGUGGGACCCACGUGGG   275 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327393 (LOC4327393), transcript variant X2, mRNA	uncharacterized LOC4327393(LOC4327393)	coding protein	psRNATarget
XM_015769089.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   |||||||||||=|=||||||||||| targets:252   UGACUCAGCGUGGGACCCACGUGGG   276 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327393 (LOC4327393), transcript variant X1, mRNA	uncharacterized LOC4327393(LOC4327393)	coding protein	psRNATarget
XM_015768213.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   |||||||||||=|=||||||||||| targets:398   UGACUCAGCGUGGGACCCACGUGGG   422 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266724 (LOC9266724), mRNA	uncharacterized LOC9266724(LOC9266724)	coding protein	psRNATarget
XM_015792930.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   |||*|||||||=|=||||||||||| targets:280   UGAGUCAGCGUGGGACCCACGUGGG   304 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270959 (LOC9270959), mRNA	uncharacterized LOC9270959(LOC9270959)	coding protein	psRNATarget
XM_015786324.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   |||*|=|||||=|=||||||||||| targets:447   UGAGUUAGCGUGGGACCCACGUGGG   471 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278311 (LOC107278311), mRNA	uncharacterized LOC107278311(LOC107278311)	coding protein	psRNATarget
AK111388.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   **|||||||||||||||||||||*| targets:12   CAACUCAGCGUAGAACCCACGUGAG   36 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-182-C02, full insert sequence	NA	coding protein	psRNATarget
XM_015777115.1	ncRNA:25   ACUGAGUCGCAUCUUGGGUGCACCC   1   **|||||||||||||||||||||*| targets:491   CAACUCAGCGUAGAACCCACGUGAG   515 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331961 (LOC4331961), mRNA	uncharacterized LOC4331961(LOC4331961)	coding protein	psRNATarget
XM_015757659.1	ncRNA:25   ACUG-------AGUCGCAUCUUGGGUGCACCC   1   ||=|-------|||||||=|=||||||||||| targets:25   UGGCGGCUAAGUCAGCGUGGGACCCACGUGGG   56 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pectin acetylesterase 9 (LOC4349316), transcript variant X1, mRNA	pectin acetylesterase 9(LOC4349316)	coding protein	psRNATarget