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BaseInfo

ncRNA ID novel_zma_miR4831
Species Zea mays
Class miRNA
Genome position Chr5:102754433-102754513 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 58 - GGGCUUAUUUUCGGCGGCGUCUGG - 81
Stem-loop(if miRNA) --                  A                   
  AGACGCCGCCGAAAAUAA CCCUUUGCCGCCGAAAAUAG
  |||||||||||||||||| |||||||||||||||||||C
  UCUGCGGCGGCUUUUAUU GGGAAACGGCGGCUUUUAUU
GG                  C                   
Stem-loop sequence AGACGCCGCCGAAAAUAAACCCUUUGCCGCCGAAAAUAGCUUAUUUUCGGCGGCAAAGGGCUUAUUUUCGGCGGCGUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239334.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget
HI407204.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
JB167665.1
ncRNA:24   GGUCUGCGGCGGCUUUUAUUCGGG   1
  |||*|*|||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

2.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget