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BaseInfo

ncRNA ID	ath-miRf10056-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - ACACCAUCAUGGUCAGAUCCG - NA
Stem-loop(if miRNA)	AGC         A   C               GCA  AA  UA  U UG   U    GGGAUGAUG AUC GACCAUGAUGGUGUU   GA  UU  UG A  AUG A    ||||||||| ||| |||||||||||||||   ||  ||  || |  |||    CCCUACUGC UAG CUGGUACUACCACAA   CU  AG  AC U  UAU G UCA         C   A               -AG  --  GG  C GU   U
Stem-loop sequence	AGCGGGAUGAUGAAUCCGACCAUGAUGGUGUUGCAGAAAUUUAUGUAUGAUGUAGUUAUUGUCCAGGGAUCGAAACACCAUCAUGGUCAGAUCCGUCAUCCCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT010452.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =||||=|||||||||||*||| targets:33   UGGAUUUGACCAUGAUGAUGU   53 Target Full Sequence	2.5	Arabidopsis thaliana At1g52120 mRNA, complete cds	NA	coding protein	psRNATarget
NM_104093.4	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =||||=|||||||||||*||| targets:134   UGGAUUUGACCAUGAUGAUGU   154 Target Full Sequence	2.5	Arabidopsis thaliana Mannose-binding lectin superfamily protein mRNA	Mannose-binding lectin superfamily protein(AT1G52120)	coding protein	psRNATarget
NM_001333528.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =||||=|||||||||||*||| targets:178   UGGAUUUGACCAUGAUGAUGU   198 Target Full Sequence	2.5	Arabidopsis thaliana Mannose-binding lectin superfamily protein mRNA	Mannose-binding lectin superfamily protein(AT1G52120)	coding protein	psRNATarget
AK229754.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =||||=|||||||||||*||| targets:148   UGGAUUUGACCAUGAUGAUGU   168 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-58-N24	NA	coding protein	psRNATarget
NM_104704.2	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =|||*||||||||||*||||| targets:531   UGGAGCUGACCAUGAAGGUGU   551 Target Full Sequence	2.5	Arabidopsis thaliana Mannose-binding lectin superfamily protein partial mRNA	Mannose-binding lectin superfamily protein(AT1G60130)	coding protein	psRNATarget
NM_001333881.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   =|||*||||||||||*||||| targets:597   UGGAGCUGACCAUGAAGGUGU   617 Target Full Sequence	2.5	Arabidopsis thaliana Mannose-binding lectin superfamily protein partial mRNA	Mannose-binding lectin superfamily protein(AT1G60130)	coding protein	psRNATarget
NM_001338931.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   ***||=||||||||||||||* targets:1165   AUCAUUUGACCAUGAUGGUGG   1185 Target Full Sequence	3.0	Arabidopsis thaliana 5'-3' exonuclease family protein (UVH3), mRNA	5'-3' exonuclease family protein(UVH3)	coding protein	psRNATarget
AF312711.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   ***||=||||||||||||||* targets:1637   AUCAUUUGACCAUGAUGGUGG   1657 Target Full Sequence	3.0	Arabidopsis thaliana UV hypersensitive protein (UVH3) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001338929.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   ***||=||||||||||||||* targets:1711   AUCAUUUGACCAUGAUGGUGG   1731 Target Full Sequence	3.0	Arabidopsis thaliana 5'-3' exonuclease family protein (UVH3), mRNA	5'-3' exonuclease family protein(UVH3)	coding protein	psRNATarget
NM_001338928.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   ***||=||||||||||||||* targets:1711   AUCAUUUGACCAUGAUGGUGG   1731 Target Full Sequence	3.0	Arabidopsis thaliana 5'-3' exonuclease family protein (UVH3), mRNA	5'-3' exonuclease family protein(UVH3)	coding protein	psRNATarget
NM_001338930.1	ncRNA:21   GCCUAGACUGGUACUACCACA   1   ***||=||||||||||||||* targets:1715   AUCAUUUGACCAUGAUGGUGG   1735 Target Full Sequence	3.0	Arabidopsis thaliana 5'-3' exonuclease family protein (UVH3), mRNA	5'-3' exonuclease family protein(UVH3)	coding protein	psRNATarget