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BaseInfo

ncRNA ID novel_zma_miR4826
Species Zea mays
Class miRNA
Genome position Chr3:46475249-46475332 [-]
Reference genome RefGen_v4
Source SRR1618882
Length 21
Mature sequence(if miRNA) 64 - ACUCCCUCUGUUUCUUUUUAA - 84
Stem-loop(if miRNA) --  U    C            AU              U  A
  AC CCCU UGUUUCUUUUUA  UGUCGCUGGAUAGU UA U
  || |||| ||||||||||||  |||||||||||||| ||
  UG GGGA ACAAAGAAAAAU  ACAGUGACCUAUCA GU U
CA  U    A            CU              C  U
Stem-loop sequence ACUCCCUCUGUUUCUUUUUAAUUGUCGCUGGAUAGUUUAAUUUUGCACUAUCCAGUGACAUCUAAAAAGAAACAAAGGGUGUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166291.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:62   AUAAAAAGAAACGGAGGGAGU   82

1.5 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
HI405830.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:62   AUAAAAAGAAACGGAGGGAGU   82

1.5 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
LQ237960.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:62   AUAAAAAGAAACGGAGGGAGU   82

1.5 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI408945.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170160.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   GUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB170476.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB170422.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI409961.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
HI409699.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   GUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   GUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:66   AUAAAAAGAAACGGAGGGAGU   86

1.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ239360.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:68   CUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
JB167691.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:68   CUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
HI407230.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:68   CUAAAAAGAAACGGAGGGAGU   88

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB169084.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:71   AUAAAAAGAAACGGAGGGAGU   91

1.5 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
HI408623.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:71   AUAAAAAGAAACGGAGGGAGU   91

1.5 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
LQ240753.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:71   AUAAAAAGAAACGGAGGGAGU   91

1.5 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
EZ067019.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:9   AUAAAAAGAAACGGAGGGAGU   29

1.5 TSA: Zea mays contig02653, mRNA sequence NA coding protein psRNATarget
EU964901.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:559   AUAAAAAGAAACGGAGGGAGU   579

1.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
XM_008664463.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:155   AUAAAAAGAAACGGAGGGAGU   175

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
EU973473.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:711   AUAAAAAGAAACGGAGGGAGU   731

1.5 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
BT062468.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:633   CUAAAAAGAAACGGAGGGAGU   653

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
EU974849.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:631   AUAAAAAGAAACGGAGGGAGU   651

1.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:631   AUAAAAAGAAACGGAGGGAGU   651

1.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:292   AUAAAAAGAAACGGAGGGAGU   312

1.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT037092.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1146   AUAAAAAGAAACGGAGGGAGU   1166

1.5 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1146   AUAAAAAGAAACGGAGGGAGU   1166

1.5 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
XM_008656230.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:49   CUAAAAAGAAACGGAGGGAGU   69

1.5 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1228   AUAAAAAGAAACGGAGGGAGU   1248

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1350   AUAAAAAGAAACGGAGGGAGU   1370

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
NM_001156655.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1350   AUAAAAAGAAACGGAGGGAGU   1370

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:203   AUAAAAAGAAACGGAGGGAGU   223

1.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
EU971616.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1224   CUAAAAAGAAACGGAGGGAGU   1244

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008651544.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1417   AUAAAAAGAAACGGAGGGAGU   1437

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1334   AUAAAAAGAAACGGAGGGAGU   1354

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1385   AUAAAAAGAAACGGAGGGAGU   1405

1.5 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT043433.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1407   AUAAAAAGAAACGGAGGGAGU   1427

1.5 Zea mays full-length cDNA clone ZM_BFc0188B19 mRNA, complete cds NA coding protein psRNATarget
EU964807.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1577   CUAAAAAGAAACGGAGGGAGU   1597

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1577   CUAAAAAGAAACGGAGGGAGU   1597

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1213   CUAAAAAGAAACGGAGGGAGU   1233

1.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1589   AUAAAAAGAAACGGAGGGAGU   1609

1.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1605   AUAAAAAGAAACGGAGGGAGU   1625

1.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1662   AUAAAAAGAAACGGAGGGAGU   1682

1.5 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1870   AUAAAAAGAAACGGAGGGAGU   1890

1.5 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2062   AUAAAAAGAAACGGAGGGAGU   2082

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_020542418.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2037   AUAAAAAGAAACGGAGGGAGU   2057

1.5 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2104   AUAAAAAGAAACGGAGGGAGU   2124

1.5 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2558   AUAAAAAGAAACGGAGGGAGU   2578

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2590   CUAAAAAGAAACGGAGGGAGU   2610

1.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2497   AUAAAAAGAAACGGAGGGAGU   2517

1.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:1525   AUAAAAAGAAACGGAGGGAGU   1545

1.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2858   AUAAAAAGAAACGGAGGGAGU   2878

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2875   AUAAAAAGAAACGGAGGGAGU   2895

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:2981   AUAAAAAGAAACGGAGGGAGU   3001

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664460.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:175   AUAAAAAGAAACGGAGGGAGU   195

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:3203   AUAAAAAGAAACGGAGGGAGU   3223

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:3212   AUAAAAAGAAACGGAGGGAGU   3232

1.5 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=||||||||
targets:3760   AUAAAAAGAAACGGAGGGAGU   3780

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
EU953133.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  |||||||||||||||*|||||
targets:1208   UUAAAAAGAAACAGAAGGAGU   1228

1.5 Zea mays clone 1385620 protein binding protein mRNA, complete cds NA coding protein psRNATarget
NM_001153573.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  |||||||||||||||*|||||
targets:1208   UUAAAAAGAAACAGAAGGAGU   1228

1.5 Zea mays protein binding protein (LOC100280655), mRNA NA coding protein psRNATarget
HI409094.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:63   UUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
JB169555.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:63   UUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
LQ241224.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:63   UUAAAACGAAACGGAGGGAGU   83

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
BT068381.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1171   UUAAAACGAAACGGAGGGAGU   1191

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1124   UUAAAACGAAACGGAGGGAGU   1144

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1230   UUAAAACGAAACGGAGGGAGU   1250

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1264   UUAAAACGAAACGGAGGGAGU   1284

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1283   UUAAAACGAAACGGAGGGAGU   1303

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1464   UUAAAACGAAACGGAGGGAGU   1484

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1464   UUAAAACGAAACGGAGGGAGU   1484

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ||||||*|||||=||||||||
targets:1328   UUAAAACGAAACGGAGGGAGU   1348

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
LQ239435.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=|||||||*
targets:68   CUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
HI407305.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=|||||||*
targets:68   CUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
JB167766.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=|||||||*
targets:68   CUAAAAAGAAACGGAGGGAGG   88

2.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
EU968044.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=|||||||*
targets:1086   CUAAAAAGAAACGGAGGGAGG   1106

2.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||=|||||||*
targets:974   CUAAAAAGAAACGGAGGGAGG   994

2.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
JB166285.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||||||||||||*|||
targets:62   AUAAAAAGAAACAGAGGAAGU   82

1.5 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||||||||||||*|||
targets:62   AUAAAAAGAAACAGAGGAAGU   82

1.5 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
LQ237954.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||||||||||||*|||
targets:62   AUAAAAAGAAACAGAGGAAGU   82

1.5 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
NM_001153043.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||*||||||||
targets:897   CUAAAAAGAAACUGAGGGAGU   917

1.5 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT055583.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||||||||*||||||||
targets:897   CUAAAAAGAAACUGAGGGAGU   917

1.5 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
BT065586.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*|||||||||||||
targets:1672   CUAAAAAUAAACAGAGGGAGU   1692

1.0 Zea mays full-length cDNA clone ZM_BFb0315O03 mRNA, complete cds NA coding protein psRNATarget
EU975832.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*|||||||||||||
targets:1682   CUAAAAAUAAACAGAGGGAGU   1702

1.0 Zea mays clone 502363 CAAX prenyl protease 1 mRNA, complete cds NA coding protein psRNATarget
NM_001159032.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*|||||||||||||
targets:1682   CUAAAAAUAAACAGAGGGAGU   1702

1.0 Zea mays CAAX prenyl protease 1 (LOC100286144), mRNA NA coding protein psRNATarget
XM_008645651.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*|||||||||||||
targets:1707   CUAAAAAUAAACAGAGGGAGU   1727

1.0 PREDICTED: Zea mays CAAX prenyl protease 1 (LOC100286144), transcript variant X1, mRNA NA coding protein psRNATarget
LQ237958.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:62   AUAAAAAAAAACGGAGGGAGU   82

2.5 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
HI405828.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:62   AUAAAAAAAAACGGAGGGAGU   82

2.5 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
JB166289.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:62   AUAAAAAAAAACGGAGGGAGU   82

2.5 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
HI408710.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170657.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:66   AUAAAACGAAACGGAGGGAGU   86

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:67   AUAAAAAAAAACGGAGGGAGU   87

2.5 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
HI405860.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:67   AUAAAAAAAAACGGAGGGAGU   87

2.5 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
JB166321.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*||||=||||||||
targets:67   AUAAAAAAAAACGGAGGGAGU   87

2.5 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
JB163748.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:73   CUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
HI403287.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:73   CUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
LQ235417.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:73   CUAAAAUGAAACGGAGGGAGU   93

2.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
LQ239449.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:233   CUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2985353 NA coding protein psRNATarget
HI407319.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:233   CUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2074227 NA coding protein psRNATarget
JB167780.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:233   CUAAAACGAAACGGAGGGAGU   253

2.5 Sequence 5444 from Patent EP2559767 NA coding protein psRNATarget
EU952378.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:775   CUAAAACGAAACGGAGGGAGU   795

2.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
BT060705.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *||||||*=||||||||||||
targets:482   AUAAAAAAGAACAGAGGGAGU   502

2.5 Zea mays full-length cDNA clone ZM_BFb0036D24 mRNA, complete cds NA coding protein psRNATarget
BT065083.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:268   CUAAAACGAAACGGAGGGAGU   288

2.5 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
BT062074.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1199   CUAAAAUGAAACGGAGGGAGU   1219

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1287   CUAAAAUGAAACGGAGGGAGU   1307

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1282   CUAAAAUGAAACGGAGGGAGU   1302

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1297   CUAAAAUGAAACGGAGGGAGU   1317

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1311   CUAAAAUGAAACGGAGGGAGU   1331

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1363   CUAAAAUGAAACGGAGGGAGU   1383

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1365   CUAAAAUGAAACGGAGGGAGU   1385

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:1471   CUAAAAUGAAACGGAGGGAGU   1491

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
BT066708.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:161   CUAAAACGAAACGGAGGGAGU   181

2.5 Zea mays full-length cDNA clone ZM_BFb0054D21 mRNA, complete cds NA coding protein psRNATarget
XM_020553332.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2060   CUAAAAUGAAACGGAGGGAGU   2080

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2091   CUAAAAUGAAACGGAGGGAGU   2111

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2173   CUAAAAUGAAACGGAGGGAGU   2193

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2204   CUAAAAUGAAACGGAGGGAGU   2224

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
LQ241745.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ***|||||||||=||||||||
targets:65   AAUAAAAGAAACGGAGGGAGU   85

2.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
JB170076.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ***|||||||||=||||||||
targets:65   AAUAAAAGAAACGGAGGGAGU   85

2.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
HI409615.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  ***|||||||||=||||||||
targets:65   AAUAAAAGAAACGGAGGGAGU   85

2.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
XM_008669143.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2803   CUAAAACGAAACGGAGGGAGU   2823

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2733   CUAAAACGAAACGGAGGGAGU   2753

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2865   CUAAAACGAAACGGAGGGAGU   2885

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2281   CUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2281   CUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2281   CUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2302   CUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2302   CUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2302   CUAAAACGAAACGGAGGGAGU   2322

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2281   CUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2240   CUAAAACGAAACGGAGGGAGU   2260

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2295   CUAAAACGAAACGGAGGGAGU   2315

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2320   CUAAAACGAAACGGAGGGAGU   2340

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:3243   CUAAAACGAAACGGAGGGAGU   3263

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:3243   CUAAAACGAAACGGAGGGAGU   3263

2.5 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2281   CUAAAACGAAACGGAGGGAGU   2301

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:21   AAUUUUUCUUUGUCUCCCUCA   1
  *|||||*|||||=||||||||
targets:2219   CUAAAACGAAACGGAGGGAGU   2239

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
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