ncRNA ID | novel_zma_miR4820 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:81012371-81012481 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287163 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUUGCUGCGUGUGGAAGAGGCUA - 24 |
Stem-loop(if miRNA) |
--  G     G   - A          GACC   UGCUGGCGCCACGCACUCAAAG   GC UUCUU UGC C CGGCGACCUC    UCC                      U   || ||||| ||| | ||||||||||    |||                      G   CG GAGAA GUG G GUCGUUGGGG    AUC                      A AU  -     G   U C          AGAA   GUGUGGUACAGGGAUGCGAACC |
Stem-loop sequence | GCGUUCUUGUGCCACGGCGACCUCGACCUCCUGCUGGCGCCACGCACUCAAAGUGACCAAGCGUAGGGACAUGGUGUGCUAAAGAGGGGUUGCUGCGUGUGGAAGAGGCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008654484.2 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC103632744 (LOC103632744), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020541156.1 |
|
3.0 | PREDICTED: Zea mays NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic-like (LOC109940833), mRNA | NA | coding protein | psRNATarget |