Search result

BaseInfo

ncRNA ID	osa-miRf10079-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUUCUUCCCGGUCAUGGGGU - NA
Stem-loop(if miRNA)	GUA        --         G  U  ---A      G   A   -   C  U CUC   CUUCUUCC  CGGUCAUGG GU GA    GGUGGC AGU GGC CGU CG U |||   ||||||||  ||||||||| || ||    |||||| ||| ||| ||| || GAG   GAGGAGGG  GCCGGUACC CG CU    UCGCCG UCA CCG GUA GU C    AAA        AA         G  C  GGCC      -   -   A   C  U
Stem-loop sequence	CUCGUACUUCUUCCCGGUCAUGGGGUUGAAGGUGGCGAGUAGGCCGUCCGUUCUUGCAUGAGCCACUGCCGCUCCGGUCCGCGCCAUGGCCGAAGGGAGGAGAAAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015795854.1	ncRNA:20   UGGGGUACUGGCCCUUCUUC   1   =||||=|||||||||||||| targets:253   GCCCCGUGACCGGGAAGAAG   272 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L34 (LOC9267671), mRNA	60S ribosomal protein L34(LOC9267671)	coding protein	psRNATarget
XM_015792908.1	ncRNA:20   UGGGGUACUGGCCCUUCUUC   1   =||||=|*|||||||||||| targets:199   GCCCCGUCACCGGGAAGAAG   218 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L34 (LOC4345669), mRNA	60S ribosomal protein L34(LOC4345669)	coding protein	psRNATarget
AK062479.1	ncRNA:20   UGGGGUACUGGCCCUUCUUC   1   =||||=|*|||||||||||| targets:205   GCCCCGUCACCGGGAAGAAG   224 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-103-G01, full insert sequence	NA	coding protein	psRNATarget