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BaseInfo

ncRNA ID novel_zma_miR4817
Species Zea mays
Class miRNA
Genome position Chr5:131368484-131368570 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 64 - GCGAGCCUCGAACGAGCUGAGCCG - 87
Stem-loop(if miRNA) --      CUC          A  -  A  CCCUUCU   A       U
  GCGAGC   GAACGAGCUG GC CG GC       UCG GCUCGUU U
  ||||||   |||||||||| || || ||       ||| ||||||| U
  CGCUCG   CUUGCUCGGC CG GC CG       AGC CGAGCGA G
AG      -AC          -  A  -  -------   -       C
Stem-loop sequence GCGAGCCUCGAACGAGCUGAGCCGAGCCCCUUCUUCGAGCUCGUUUUUGCAGCGAGCCGAGCCGAGCCGGCUCGUUCCAGCUCGCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948448.1
ncRNA:24   GCCGAGUCGAGCAAGCUCCGAGCG   1
  ||||||=|||||||||||||||||
targets:275   CGGCUCGGCUCGUUCGAGGCUCGC   298

1.0 Zea mays clone 376771 mRNA sequence NA coding protein psRNATarget