Search result

BaseInfo

ncRNA ID novel_zma_miR4802
Species Zea mays
Class miRNA
Genome position Chr4:142669127-142669232 [+]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 83 - UGUACAAUAUUAGCAAUGGACGGU - 106
Stem-loop(if miRNA) --U   G        --A      GUAU A     U  G  UG      AAAUC
   GUU GUUGCUAA   UGUAUA    G CGACU AC GU  GUUGCU     U
   ||| ||||||||   ||||||    | ||||| || ||  ||||||     A
   CAG UAACGAUU   ACAUGU    C GCUGG UG CA  CAACGA     U
UGG   G        AUA      AAAU -     U  G  CA      CAUGA
Stem-loop sequence UGUUGGUUGCUAAAUGUAUAGUAUGACGACUUACGGUUGGUUGCUAAAUCUAUAGUACAGCAACACACGGUUGGUCGCUAAAUGUACAAUAUUAGCAAUGGACGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT083982.1
ncRNA:24   UGGCAGGUAACGAUUAUAACAUGU   1
  |||||||=||||||||||||||=|
targets:1214   ACCGUCCGUUGCUAAUAUUGUAUA   1237

2.5 Zea mays full-length cDNA clone ZM_BFb0061H19 mRNA, complete cds NA coding protein psRNATarget
NM_001177172.1
ncRNA:24   UGGCAGGUAACGAUUAUAACAUGU   1
  |||||||=||||||||||||||=|
targets:1214   ACCGUCCGUUGCUAAUAUUGUAUA   1237

2.5 Zea mays uncharacterized LOC100384696 (LOC100384696), mRNA NA coding protein psRNATarget