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BaseInfo

ncRNA ID	novel_zma_miR4801
Species	Zea mays
Class	miRNA
Genome position	Chr4:141647918-141647996 [+]
Reference genome	RefGen_v4
Source	SRR2287163;SRR5451004;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - AGACACUCGGCAAAGCAGAUUCUU - 24
Stem-loop(if miRNA)	--               C G        C         AA   AGACACUCGGCAAAG A AUUCUUUG CGAGUGUUA  U   ||||||||||||||| | |||||||| |||||||||   UCUGUGAGCUGUUUC U UGAGAAAU GCUCACGGU  A CU               - G        A         CA
Stem-loop sequence	AGACACUCGGCAAAGCAGAUUCUUUGCCGAGUGUUAAAUAACUGGCACUCGAUAAAGAGUGUCUUUGUCGAGUGUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238622.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2985353	NA	coding protein	psRNATarget
JB166953.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2559767	NA	coding protein	psRNATarget
HI406492.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   ||-|=|=||=|||||||||||||| targets:62   AA-AGUUUGUUUUGCCGAGUGUCU   84 Target Full Sequence	2.0	Sequence 4617 from Patent EP2074227	NA	coding protein	psRNATarget
HI406041.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238171.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2985353	NA	coding protein	psRNATarget
JB166502.1	ncRNA:24   UUCUUAGACGAAACGGCUCACAGA   1   =*|||*||*||||||||||||||| targets:135   GCGAAGCUACUUUGCCGAGUGUCU   158 Target Full Sequence	2.0	Sequence 4166 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
JB166664.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
HI406203.1	ncRNA:24   UUCU-UAGACGAAACGGCUCACAGA   1   ||||-|*||*||||||||||||||* targets:44   AAGAUAACUCCUUUGCCGAGUGUCA   68 Target Full Sequence	3.0	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget