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BaseInfo

ncRNA ID novel_zma_miR4799
Species Zea mays
Class miRNA
Genome position Chr4:37340834-37340909 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 24
Mature sequence(if miRNA) 53 - AGUUGGCUCUCGGCAAAGACUGAC - 76
Stem-loop(if miRNA) --  U               -A   ---A        AGC
  AG UGGCUCUCGGCAAAG  CUG    CGGCCGUC   U
  || |||||||||||||||  |||    ||||||||
  UC ACCGAGAGCCGUUUC  GGC    GCCGGCAG   G
UU  C               GC   AAUC        GGU
Stem-loop sequence AGUUGGCUCUCGGCAAAGACUGACGGCCGUCAGCUGUGGGACGGCCGCUAACGGCGCUUUGCCGAGAGCCACCUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT063684.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget
NM_001175015.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget