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BaseInfo

ncRNA ID novel_zma_miR4794
Species Zea mays
Class miRNA
Genome position Chr4:182466982-182467031 [-]
Reference genome RefGen_v4
Source SRR2287163
Length 23
Mature sequence(if miRNA) 1 - UGGAUUUCUGGUGGAGACCGUUU - 23
Stem-loop(if miRNA) ---A       UU    U     A  U
    GGUUUCC  GCCA AGAUC CA U
    |||||||  |||| ||||| ||
    CCAGAGG  UGGU UUUAG GU C
UUUG       --    C     -  G
Stem-loop sequence AGGUUUCCUUGCCAUAGAUCACAUUCGUGGAUUUCUGGUGGAGACCGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001151191.1
ncRNA:23   UUUGCCAGAGGUGGUCUUUAGGU   1
  ***|**|||||||||||||||||
targets:83   CCUCCAUCUCCACCAGAAAUCCA   105

2.0 Zea mays uncharacterized LOC100277688 (LOC100277688), mRNA NA coding protein psRNATarget
EU970041.1
ncRNA:23   UUUGCCAGAGGUGGUCUUUAGGU   1
  ***|**|||||||||||||||||
targets:83   CCUCCAUCUCCACCAGAAAUCCA   105

2.0 Zea mays clone 338956 hypothetical protein mRNA, complete cds NA coding protein psRNATarget