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BaseInfo

ncRNA ID	novel_zma_miR4786
Species	Zea mays
Class	miRNA
Genome position	Chr3:34840442-34840490 [+]
Reference genome	RefGen_v4
Source	SRR2287162;SRR2287163
Length	24
Mature sequence(if miRNA)	1 - UAUGAUUUGUGGGUCUGAUGGCAU - 24
Stem-loop(if miRNA)	--           G U  GA    A   UAUGAUUUGUG G CU  UGGC U   ||||||||||| | ||  |||| A   AUACUAAACAC C GA  GCCG U UA           A -  -A    U
Stem-loop sequence	UAUGAUUUGUGGGUCUGAUGGCAUAUUGCCGAAGCACACAAAUCAUAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU970008.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=||||||||||||||| targets:1577   AUGCCAUCGGACCCACAAAUCAUA   1600 Target Full Sequence	1.0	Zea mays clone 338473 mRNA sequence	NA	coding protein	psRNATarget
XM_008680463.2	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=||||||||||||||| targets:1679   AUGCCAUCGGACCCACAAAUCAUA   1702 Target Full Sequence	1.0	PREDICTED: Zea mays serine decarboxylase 1 (LOC103653609), mRNA	NA	coding protein	psRNATarget
XM_020550876.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=||||||||||||||| targets:94   AUGCCAUCGGACCCACAAAUCAUA   117 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103650478 (LOC103650478), mRNA	NA	coding protein	psRNATarget
BT063154.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=|=||||||||||||| targets:637   AUGCCAUCGGGCCCACAAAUCAUA   660 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0031P16 mRNA, complete cds	NA	coding protein	psRNATarget
EU953112.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=|=||||||||||||| targets:653   AUGCCAUCGGGCCCACAAAUCAUA   676 Target Full Sequence	2.0	Zea mays clone 1383350 wound-induced protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153569.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=|=||||||||||||| targets:653   AUGCCAUCGGGCCCACAAAUCAUA   676 Target Full Sequence	2.0	Zea mays wound-induced protein (LOC100280651), mRNA	NA	coding protein	psRNATarget
DQ245028.1	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   ||||||||=|=||||||||||||| targets:652   AUGCCAUCGGGCCCACAAAUCAUA   675 Target Full Sequence	2.0	Zea mays clone 12350 mRNA sequence	NA	coding protein	psRNATarget
XM_008655066.2	ncRNA:24   UACGGUAGUCUGGGUGUUUAGUAU   1   *|||=|||=|||*||||||||||| targets:1792   UUGCUAUCGGACACACAAAUCAUA   1815 Target Full Sequence	2.5	PREDICTED: Zea mays putative zinc finger CCCH domain-containing protein 51 (LOC103633361), mRNA	NA	coding protein	psRNATarget