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BaseInfo

ncRNA ID novel_zma_miR4785
Species Zea mays
Class miRNA
Genome position Chr10:1980439-1980541 [-]
Reference genome RefGen_v4
Source SRR2287162;SRR4237221;SRR4237226
Length 21
Mature sequence(if miRNA) 1 - UCUAAAGUUUGGAGGAGGGGA - 21
Stem-loop(if miRNA) --                 U         --     C  AUAAA      -A  A
  UUCUCCUCUAAGCUUUA AGCUCUAAA  CUUUA AG     GCUUUA  AC A
  ||||||||||||||||| |||||||||  ||||| ||     ||||||  ||
  GGGAGGAGGUUUGAAAU UCGAGAUUU  GAAAU UC     UGAAAU  UG G
AG                 C         UC     C  ----G      CG  U
Stem-loop sequence UUCUCCUCUAAGCUUUAUAGCUCUAAACUUUACAGAUAAAGCUUUAAACAAGUGUGCUAAAGUGCUCUAAAGCUUUUAGAGCUCUAAAGUUUGGAGGAGGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU955582.1
ncRNA:21   AGGGGAGGAGGUUUGAAAUCU   1
  *==|||||||||=||||||||
targets:21   GUUCCUCCUCCAGACUUUAGA   41

2.5 Zea mays clone 1537950 hypothetical protein mRNA, complete cds NA coding protein psRNATarget