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BaseInfo

ncRNA ID novel_zma_miR4779
Species Zea mays
Class miRNA
Genome position Chr3:144084388-144084445 [-]
Reference genome RefGen_v4
Source SRR1618882;SRR1618883;SRR4237220;SRR4237222;SRR4237223;SRR4237225;SRR4237226
Length 22
Mature sequence(if miRNA) 37 - CUGGCCGUGGAUCUCCCAUGCC - 58
Stem-loop(if miRNA) --C        G     --     -     U
   UGGCCGUG AUCUC  CCAUG CCACG G
   |||||||| |||||  ||||| |||||
   GCCGGUGC UGGAG  GGUGC GGUGC G
GGA        -     CU     U     U
Stem-loop sequence CUGGCCGUGGAUCUCCCAUGCCACGUGGUCGUGGUCGUGGUCGAGGUCGUGGCCGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948166.1
ncRNA:22   CCGUACCCUCUAGGUGCCGGUC   1
  *|||*||||||||||=||||||
targets:177   UGCAGGGGAGAUCCAUGGCCAG   198

2.5 Zea mays clone 370744 mRNA sequence NA coding protein psRNATarget