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BaseInfo

ncRNA ID novel_zma_miR4777
Species Zea mays
Class miRNA
Genome position Chr3:208957124-208957184 [+]
Reference genome RefGen_v4
Source SRR2287162
Length 24
Mature sequence(if miRNA) 38 - UAAUUUAAGAACGUGGGUACCCAU - 61
Stem-loop(if miRNA) --       G          -    G    G
  GGGUACC ACGUUCUUAA UUGA UUAU U
  ||||||| |||||||||| |||| ||||
  CCCAUGG UGCAAGAAUU AAUU GGUG U
UA       G          U    G    C
Stem-loop sequence GGGUACCGACGUUCUUAAUUGAGUUAUGUUCGUGGGUUAAUUUAAGAACGUGGGUACCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163877.1
ncRNA:24   UACCCAUGGGUGCAAGAAUUUAAU   1
  =||||||||||||||||||*||||
targets:59   GUGGGUACCCACGUUCUUAUAUUA   82

1.5 Sequence 1541 from Patent EP2559767 NA coding protein psRNATarget
HI403416.1
ncRNA:24   UACCCAUGGGUGCAAGAAUUUAAU   1
  =||||||||||||||||||*||||
targets:59   GUGGGUACCCACGUUCUUAUAUUA   82

1.5 Sequence 1541 from Patent EP2074227 NA coding protein psRNATarget
LQ235546.1
ncRNA:24   UACCCAUGGGUGCAAGAAUUUAAU   1
  =||||||||||||||||||*||||
targets:59   GUGGGUACCCACGUUCUUAUAUUA   82

1.5 Sequence 1541 from Patent EP2985353 NA coding protein psRNATarget