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BaseInfo

ncRNA ID novel_zma_miR4769
Species Zea mays
Class miRNA
Genome position Chr2:128892768-128892851 [+]
Reference genome RefGen_v4
Source SRR2287162
Length 24
Mature sequence(if miRNA) 1 - ACCAGGCUGGACUCCGGUGAACAG - 24
Stem-loop(if miRNA) --   AG   G   --         CAGGC   - CUCGGGAGAA
  ACC  GCU GAC  UCCGGUGAA     CUC U          U
  |||  ||| |||  |||||||||     ||| |          U
  UGG  UGG CUG  AGGCCACUU     AUC G          U
CG   --   G   UC         --AAU   A CAUGCGGCGG
Stem-loop sequence ACCAGGCUGGACUCCGGUGAACAGGCCUCUCUCGGGAGAAUUUGGCGGCGUACGACUAUAAUUCACCGGACUGUCGGGUGGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT066013.2
ncRNA:24   GACAAGUGGCCUCAGGUCGGACCA   1
  *|*||||||||||*|||||||||*
targets:761   AUUUUCACCGGAGACCAGCCUGGC   784

2.5 Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds NA coding protein psRNATarget
NM_001175715.1
ncRNA:24   GACAAGUGGCCUCAGGUCGGACCA   1
  *|*||||||||||*|||||||||*
targets:761   AUUUUCACCGGAGACCAGCCUGGC   784

2.5 Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA NA coding protein psRNATarget