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BaseInfo

ncRNA ID novel_zma_miR4762
Species Zea mays
Class miRNA
Genome position Chr2:25578281-25578447 [-]
Reference genome RefGen_v4
Source SRR2287162
Length 24
Mature sequence(if miRNA) 144 - CCUGGUGCGGCUGAACCGGAUGGC - 167
Stem-loop(if miRNA) --      GC    G                 G                                 G              AA
  CCUGGU  GGCU AACCGGAUGGCACCGUU AGCUAGGGCUUCCUCUAGUUAUUGGAAGCCCAG GCUUAUAAUAUAUA  C
  ||||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  U
  GGACUA  UCGA UUGGUCUACCGUGGCAG UCGAUCCCGAAGGAGAUUAAUAACCUUCGGGUC CGAAUAUUAUAUAU  A
CC      GA    G                 A                                 G              AU
Stem-loop sequence CCUGGUGCGGCUGAACCGGAUGGCACCGUUGAGCUAGGGCUUCCUCUAGUUAUUGGAAGCCCAGGGCUUAUAAUAUAUAAACUAUAUAUAUAUUAUAAGCGCUGGGCUUCCAAUAAUUAGAGGAAGCCCUAGCUAGACGGUGCCAUCUGGUUGAGCUAGAUCAGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544200.1
ncRNA:24   CGGUAGGCCAAGUCGGCGUGGUCC   1
  |||||||||||=||||||||||||
targets:574   GCCAUCCGGUUUAGCCGCACCAGG   597

1.5 PREDICTED: Zea mays uncharacterized LOC109942302 (LOC109942302), mRNA NA coding protein psRNATarget