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BaseInfo

ncRNA ID	novel_zma_miR4752
Species	Zea mays
Class	miRNA
Genome position	Chr10:54333003-54333050 [-]
Reference genome	RefGen_v4
Source	SRR2287162
Length	21
Mature sequence(if miRNA)	1 - AUUGAUAUGGAUUGGGAGGGA - 21
Stem-loop(if miRNA)	--A  UU          G    GG    UU  CAAUCCAUAU GAUU  A    ||  |||||||||| ||||    GA  GUUAGGUAUA UUAG  G AGG  GG          G    GG
Stem-loop sequence	AUUUUCAAUCCAUAUGGAUUGGAGGGGAUUGAUAUGGAUUGGGAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008673290.2	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   |||||||||||||=||||||| targets:1964   UCCCUCCCAAUCCGUAUCAAU   1984 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103648912 (LOC103648912), mRNA	NA	coding protein	psRNATarget
XM_020548987.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   |||||||||||||=||||||| targets:1964   UCCCUCCCAAUCCGUAUCAAU   1984 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103648913 (LOC103648913), mRNA	NA	coding protein	psRNATarget
NM_001348011.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   ||=|||=|||||||||||||| targets:429   UCUCUCUCAAUCCAUAUCAAU   449 Target Full Sequence	2.0	Zea mays hypothetical protein (LOC100277538), mRNA	NA	coding protein	psRNATarget
XM_020545207.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   ||=||||||||||=||||||| targets:6   UCUCUCCCAAUCCGUAUCAAU   26 Target Full Sequence	2.5	PREDICTED: Zea mays solute carrier family 25 member 44 (LOC100384216), mRNA	NA	coding protein	psRNATarget
BT055069.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   |||||=|||||||=||||||| targets:960   UCCCUUCCAAUCCGUAUCAAU   980 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008654469.2	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   |||||=|||||||=||||||| targets:3104   UCCCUUCCAAUCCGUAUCAAU   3124 Target Full Sequence	2.5	PREDICTED: Zea mays U-box domain-containing protein 35 (LOC103632728), mRNA	NA	coding protein	psRNATarget
BT018999.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   ||||||=||||||||||*||| targets:468   UCCCUCUCAAUCCAUAUGAAU   488 Target Full Sequence	2.5	Zea mays clone Contig487.F mRNA sequence	NA	coding protein	psRNATarget
EZ060045.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:123   ACUCUGCCAAUCCAUAUCAAU   143 Target Full Sequence	2.0	TSA: Zea mays contig61167, mRNA sequence	NA	coding protein	psRNATarget
BT019027.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:117   ACUCUGCCAAUCCAUAUCAAU   137 Target Full Sequence	2.0	Zea mays clone Contig532.F mRNA sequence	NA	coding protein	psRNATarget
AY105967.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:393   ACUCUGCCAAUCCAUAUCAAU   413 Target Full Sequence	2.0	Zea mays PCO133275 mRNA sequence	NA	coding protein	psRNATarget
BT043124.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:289   ACUCUGCCAAUCCAUAUCAAU   309 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0101C15 mRNA, complete cds	NA	coding protein	psRNATarget
EU953645.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:310   ACUCUGCCAAUCCAUAUCAAU   330 Target Full Sequence	2.0	Zea mays clone 1442203 serologically defined breast cancer antigen NY-BR-84 mRNA, complete cds	NA	coding protein	psRNATarget
BT018471.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:296   ACUCUGCCAAUCCAUAUCAAU   316 Target Full Sequence	2.0	Zea mays clone EL01N0422D05.d mRNA sequence	NA	coding protein	psRNATarget
XM_008656057.2	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:448   ACUCUGCCAAUCCAUAUCAAU   468 Target Full Sequence	2.0	PREDICTED: Zea mays DUF1692 domain, endoplasmic reticulum vescicle transporter protein (LOC100192107), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU959606.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:448   ACUCUGCCAAUCCAUAUCAAU   468 Target Full Sequence	2.0	Zea mays clone 218844 serologically defined breast cancer antigen NY-BR-84 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137530.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:941   ACUCUGCCAAUCCAUAUCAAU   961 Target Full Sequence	2.0	Zea mays DUF1692 domain, endoplasmic reticulum vescicle transporter protein (LOC100192107), mRNA	NA	coding protein	psRNATarget
BT034418.1	ncRNA:21   AGGGAGGGUUAGGUAUAGUUA   1   *|=||*||||||||||||||| targets:941   ACUCUGCCAAUCCAUAUCAAU   961 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0170E06 mRNA, complete cds	NA	coding protein	psRNATarget